Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | YHS_RS02870 | Genome accession | NZ_CP024176 |
| Coordinates | 646518..647189 (+) | Length | 223 a.a. |
| NCBI ID | WP_099833606.1 | Uniprot ID | - |
| Organism | Moraxella osloensis strain YHS | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 641518..652189
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YHS_RS02855 (YHS_02860) | - | 641941..642459 (+) | 519 | WP_007116392.1 | DUF6586 family protein | - |
| YHS_RS02860 (YHS_02865) | - | 642535..645264 (-) | 2730 | WP_099833604.1 | penicillin-binding protein 1A | - |
| YHS_RS02865 (YHS_02870) | pilM | 645466..646518 (+) | 1053 | WP_099833605.1 | pilus assembly protein PilM | Machinery gene |
| YHS_RS02870 (YHS_02875) | pilN | 646518..647189 (+) | 672 | WP_099833606.1 | PilN domain-containing protein | Machinery gene |
| YHS_RS02875 (YHS_02880) | comO/pilO | 647192..647950 (+) | 759 | WP_198510467.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| YHS_RS02880 (YHS_02885) | comL/pilP | 647940..648473 (+) | 534 | WP_099833607.1 | pilus assembly protein PilP | Machinery gene |
| YHS_RS02885 (YHS_02890) | comQ/pilQ | 648491..650839 (+) | 2349 | WP_099833608.1 | type IV pilus secretin family protein | Machinery gene |
| YHS_RS02890 (YHS_02895) | - | 650947..651483 (+) | 537 | WP_062334134.1 | shikimate kinase | - |
Sequence
Protein
Download Length: 223 a.a. Molecular weight: 24725.30 Da Isoelectric Point: 9.6374
>NTDB_id=211368 YHS_RS02870 WP_099833606.1 646518..647189(+) (pilN) [Moraxella osloensis strain YHS]
MAKINLLPWRQELREQRNREFMTLVVAVLLLSLLGAFAAWSYYKNTLENQQLANERIKQENANLDKALKEIQTLEQQRDD
IIARMKVIQDLQGRRPVPVRIWDDIARIIPAQMYLTSMKREADTITFTGQADNPNVISTFMRSLDGTQWLEKSAVVSIQQ
PNAVAYQAPTPAPAAGNISASSTSATLPEANYVTFVVTTMVKQTQVASATAASGVAASASKEK
MAKINLLPWRQELREQRNREFMTLVVAVLLLSLLGAFAAWSYYKNTLENQQLANERIKQENANLDKALKEIQTLEQQRDD
IIARMKVIQDLQGRRPVPVRIWDDIARIIPAQMYLTSMKREADTITFTGQADNPNVISTFMRSLDGTQWLEKSAVVSIQQ
PNAVAYQAPTPAPAAGNISASSTSATLPEANYVTFVVTTMVKQTQVASATAASGVAASASKEK
Nucleotide
Download Length: 672 bp
>NTDB_id=211368 YHS_RS02870 WP_099833606.1 646518..647189(+) (pilN) [Moraxella osloensis strain YHS]
ATGGCAAAGATTAACTTACTTCCTTGGCGTCAAGAACTTCGTGAACAAAGAAACCGTGAGTTTATGACTTTAGTGGTTGC
GGTATTATTATTATCACTACTTGGTGCCTTTGCGGCATGGAGTTACTATAAAAACACCCTAGAAAACCAGCAGCTTGCTA
ATGAGCGCATCAAACAAGAAAACGCTAATTTAGACAAGGCGTTAAAAGAAATCCAAACCCTTGAGCAGCAGCGTGATGAT
ATCATCGCGCGTATGAAAGTGATTCAAGACTTGCAAGGTCGTCGCCCTGTCCCTGTTCGTATTTGGGACGATATTGCCAG
AATTATCCCCGCACAAATGTATTTGACCAGTATGAAGCGAGAAGCTGATACCATCACCTTTACCGGTCAAGCCGACAACC
CGAATGTGATTTCAACATTTATGCGCAGTCTTGATGGGACGCAGTGGTTAGAAAAATCGGCGGTGGTCAGTATACAGCAG
CCCAATGCAGTGGCTTATCAAGCCCCCACACCCGCACCTGCTGCCGGTAACATCAGCGCTAGCAGTACCAGCGCAACATT
ACCAGAAGCCAATTACGTGACTTTTGTGGTAACAACCATGGTTAAGCAAACCCAAGTCGCCAGTGCCACCGCTGCAAGTG
GCGTTGCGGCAAGTGCGAGTAAGGAGAAATAA
ATGGCAAAGATTAACTTACTTCCTTGGCGTCAAGAACTTCGTGAACAAAGAAACCGTGAGTTTATGACTTTAGTGGTTGC
GGTATTATTATTATCACTACTTGGTGCCTTTGCGGCATGGAGTTACTATAAAAACACCCTAGAAAACCAGCAGCTTGCTA
ATGAGCGCATCAAACAAGAAAACGCTAATTTAGACAAGGCGTTAAAAGAAATCCAAACCCTTGAGCAGCAGCGTGATGAT
ATCATCGCGCGTATGAAAGTGATTCAAGACTTGCAAGGTCGTCGCCCTGTCCCTGTTCGTATTTGGGACGATATTGCCAG
AATTATCCCCGCACAAATGTATTTGACCAGTATGAAGCGAGAAGCTGATACCATCACCTTTACCGGTCAAGCCGACAACC
CGAATGTGATTTCAACATTTATGCGCAGTCTTGATGGGACGCAGTGGTTAGAAAAATCGGCGGTGGTCAGTATACAGCAG
CCCAATGCAGTGGCTTATCAAGCCCCCACACCCGCACCTGCTGCCGGTAACATCAGCGCTAGCAGTACCAGCGCAACATT
ACCAGAAGCCAATTACGTGACTTTTGTGGTAACAACCATGGTTAAGCAAACCCAAGTCGCCAGTGCCACCGCTGCAAGTG
GCGTTGCGGCAAGTGCGAGTAAGGAGAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
38.326 |
100 |
0.39 |