Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AHTJS_RS03390 Genome accession   NZ_CP018871
Coordinates   692381..692764 (+) Length   127 a.a.
NCBI ID   WP_004640629.1    Uniprot ID   -
Organism   Acinetobacter haemolyticus strain TJS01     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 687381..697764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AHTJS_RS03365 (AHTJS_03355) - 687994..688440 (+) 447 WP_075314910.1 SRPBCC family protein -
  AHTJS_RS03370 (AHTJS_03360) - 688627..688971 (+) 345 WP_005089274.1 zinc ribbon domain-containing protein YjdM -
  AHTJS_RS03375 (AHTJS_03365) - 689131..689466 (+) 336 WP_004640635.1 YegP family protein -
  AHTJS_RS03380 (AHTJS_03370) - 689528..691243 (-) 1716 WP_005089277.1 proline--tRNA ligase -
  AHTJS_RS03385 (AHTJS_03375) - 691446..692102 (-) 657 WP_075314912.1 hypothetical protein -
  AHTJS_RS03390 (AHTJS_03380) pilG 692381..692764 (+) 384 WP_004640629.1 twitching motility response regulator PilG Regulator
  AHTJS_RS03395 (AHTJS_03385) - 692786..693148 (+) 363 WP_004640626.1 response regulator -
  AHTJS_RS03400 (AHTJS_03390) - 693197..693733 (+) 537 WP_004640625.1 chemotaxis protein CheW -
  AHTJS_RS03405 (AHTJS_03395) - 693781..695862 (+) 2082 WP_004640623.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14199.33 Da        Isoelectric Point: 4.7278

>NTDB_id=211162 AHTJS_RS03390 WP_004640629.1 692381..692764(+) (pilG) [Acinetobacter haemolyticus strain TJS01]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLSAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=211162 AHTJS_RS03390 WP_004640629.1 692381..692764(+) (pilG) [Acinetobacter haemolyticus strain TJS01]
ATGGAAGATAAATTTCAAAATTTAAAGGTGATGGTGATTGACGATTCTAAAACGATTCGTCGTACAGCTGAGACCTTATT
ACAACGTGAAGGTTGTGAGGTAATTACTGCAGTTGACGGTTTTGAAGCATTATCAAAAATTGCTGAAGCAAATCCAGATA
TTGTTTTTGTGGATATTATGATGCCGCGTTTAGACGGTTATCAAACCTGTGCATTGATCAAGAATTCATTAAATTATCAA
AATATTCCAGTCATCATGCTTTCAAGCAAAGACGGTTTATTTGATCAAGCAAAAGGGCGTGTTGTGGGGTCTGATGAATA
TTTAACTAAGCCGTTTAGTAAGGATGAGCTGTTGAGTGCGATCCGTAACCATGTCAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.85

100

0.969
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37

Multiple sequence alignment