Detailed information NTG0210844

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: BUM80_RS07715
• Genome accession: NZ_CP018838
• Coordinates: 1408776..1409237 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250531.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 11A
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1403776..1414237

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BUM80_RS07685 (BUM80_07885)	-	1404083..1404907 (-)	825	WP_000727904.1	membrane protein insertase YidC	-
BUM80_RS07690 (BUM80_07890)	rnpA	1404882..1405253 (-)	372	WP_000739246.1	ribonuclease P protein component	-
BUM80_RS12030	-	1405270..1405401 (-)	132	WP_000768904.1	hypothetical protein	-
BUM80_RS07695 (BUM80_07895)	-	1405402..1406592 (-)	1191	WP_000167765.1	acetate kinase	-
BUM80_RS07700 (BUM80_07900)	comYH	1406643..1407596 (-)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
BUM80_RS07705 (BUM80_07905)	-	1407657..1408249 (-)	593	Protein_1424	class I SAM-dependent methyltransferase	-
BUM80_RS07710 (BUM80_07915)	comGG/cglG	1408352..1408798 (-)	447	WP_001809944.1	competence type IV pilus minor pilin ComGG	Machinery gene
BUM80_RS07715 (BUM80_07920)	comGF/cglF	1408776..1409237 (-)	462	WP_000250531.1	competence type IV pilus minor pilin ComGF	Machinery gene
BUM80_RS07720 (BUM80_07925)	comGE/cglE	1409200..1409502 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
BUM80_RS07725 (BUM80_07930)	comGD/cglD	1409465..1409899 (-)	435	WP_033606693.1	competence type IV pilus minor pilin ComGD	Machinery gene
BUM80_RS07730 (BUM80_07935)	comGC/cglC	1409862..1410185 (-)	324	WP_000738628.1	comG operon protein ComGC	Machinery gene
BUM80_RS07735 (BUM80_07940)	comGB/cglB	1410187..1411203 (-)	1017	WP_078130737.1	competence type IV pilus assembly protein ComGB	Machinery gene
BUM80_RS07740 (BUM80_07945)	comGA/cglA/cilD	1411151..1412092 (-)	942	WP_000249536.1	competence type IV pilus ATPase ComGA	Machinery gene
BUM80_RS07745 (BUM80_07950)	-	1412168..1412533 (-)	366	WP_162797816.1	DUF1033 family protein	-
BUM80_RS07750 (BUM80_07955)	-	1412684..1413742 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17849.37 Da
• Isoelectric Point: 6.4832

>NTDB_id=210844 BUM80_RS07715 WP_000250531.1 1408776..1409237(-) (comGF/cglF) [Streptococcus pneumoniae strain 11A]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEVELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKSDDFRKTDASGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEES

Nucleotide

• Length: 462 bp

>NTDB_id=210844 BUM80_RS07715 WP_000250531.1 1408776..1409237(-) (comGF/cglF) [Streptococcus pneumoniae strain 11A]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGACCAACTTGAGGTAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACCGATGCTAG
TGGACGGGGGTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAGAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	95.425	100	0.954
comGF/cglF	Streptococcus pneumoniae D39	95.425	100	0.954
comGF/cglF	Streptococcus pneumoniae R6	95.425	100	0.954
comGF/cglF	Streptococcus pneumoniae TIGR4	95.425	100	0.954
comGF/cglF	Streptococcus mitis SK321	92.81	100	0.928
comGF/cglF	Streptococcus mitis NCTC 12261	91.503	100	0.915