Detailed information
Bioinformatically predicted
Overview
| Name | pptB | Type | Regulator |
| Locus tag | CR542_RS09730 | Genome accession | NZ_CP024126 |
| Coordinates | 1891749..1892789 (-) | Length | 346 a.a. |
| NCBI ID | WP_013730555.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain HA0609 | ||
| Function | export ComS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1886749..1897789
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR542_RS12035 | - | 1887584..1887701 (-) | 118 | Protein_1832 | translation initiation factor IF-2 N-terminal domain-containing protein | - |
| CR542_RS09700 (CR542_09660) | - | 1887719..1888027 (-) | 309 | WP_002942377.1 | YlxQ-related RNA-binding protein | - |
| CR542_RS09705 (CR542_09665) | rnpM | 1888014..1888310 (-) | 297 | WP_002942375.1 | RNase P modulator RnpM | - |
| CR542_RS09710 (CR542_09670) | nusA | 1888327..1889469 (-) | 1143 | WP_004194726.1 | transcription termination factor NusA | - |
| CR542_RS09715 (CR542_09675) | rimP | 1889542..1890012 (-) | 471 | WP_002942369.1 | ribosome maturation factor RimP | - |
| CR542_RS09720 (CR542_09680) | trmB | 1890270..1890908 (-) | 639 | WP_002939002.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| CR542_RS09725 (CR542_09685) | ccrZ | 1890905..1891699 (-) | 795 | WP_013730554.1 | cell cycle regulator CcrZ | - |
| CR542_RS09730 (CR542_09690) | pptB | 1891749..1892789 (-) | 1041 | WP_013730555.1 | ABC transporter permease | Regulator |
| CR542_RS09735 (CR542_09695) | pptA | 1892786..1893520 (-) | 735 | WP_002939204.1 | ABC transporter ATP-binding protein | Regulator |
| CR542_RS09740 (CR542_09700) | - | 1893583..1893996 (+) | 414 | WP_002939203.1 | HIT family protein | - |
| CR542_RS09745 (CR542_09705) | - | 1893998..1894300 (+) | 303 | WP_002939199.1 | hypothetical protein | - |
| CR542_RS09750 (CR542_09710) | - | 1894409..1895602 (-) | 1194 | WP_002939198.1 | LCP family protein | - |
| CR542_RS09755 (CR542_09715) | - | 1895599..1896126 (-) | 528 | WP_002939196.1 | GNAT family N-acetyltransferase | - |
| CR542_RS09760 (CR542_09720) | tsaE | 1896119..1896559 (-) | 441 | WP_024376437.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
Sequence
Protein
Download Length: 346 a.a. Molecular weight: 40172.54 Da Isoelectric Point: 10.0123
>NTDB_id=210684 CR542_RS09730 WP_013730555.1 1891749..1892789(-) (pptB) [Streptococcus suis strain HA0609]
MKELFQQRRLDFLNRCSKYLRYVLNDHFVLVLMVLLGFLSLQYRQLLLSFPENPLPIVFVVIAISLLVLVSGRIATYLEE
ADQIFLLTKEKDILQGLEVAARCTVLFWSSIQVVVQLVLLPIYLKLGLPVWMIVAGLLTLLVLKCLFVKRQLVAYQSQGV
LDWSKAIQDEQKRKQSILRFFALFTTVKGISTTVKPRSYLNGILRLVKSRQTWFYLYLRAFLRSGDYLGLTIRLLLLAIL
SLFAIEESWLSIGLVLVFHYLLVFQLLGLYKHYDYQYITQLYPLEKDSKKIGLQNLLRVILYSLLLVELGFALLFSKENT
MVVVLLLVGIFLHEIYLPLKLKKLID
MKELFQQRRLDFLNRCSKYLRYVLNDHFVLVLMVLLGFLSLQYRQLLLSFPENPLPIVFVVIAISLLVLVSGRIATYLEE
ADQIFLLTKEKDILQGLEVAARCTVLFWSSIQVVVQLVLLPIYLKLGLPVWMIVAGLLTLLVLKCLFVKRQLVAYQSQGV
LDWSKAIQDEQKRKQSILRFFALFTTVKGISTTVKPRSYLNGILRLVKSRQTWFYLYLRAFLRSGDYLGLTIRLLLLAIL
SLFAIEESWLSIGLVLVFHYLLVFQLLGLYKHYDYQYITQLYPLEKDSKKIGLQNLLRVILYSLLLVELGFALLFSKENT
MVVVLLLVGIFLHEIYLPLKLKKLID
Nucleotide
Download Length: 1041 bp
>NTDB_id=210684 CR542_RS09730 WP_013730555.1 1891749..1892789(-) (pptB) [Streptococcus suis strain HA0609]
ATGAAAGAATTGTTTCAACAACGCCGACTAGATTTTTTAAATCGTTGTTCCAAGTATCTGCGCTATGTTCTGAATGACCA
TTTTGTTTTGGTTCTCATGGTTTTATTAGGCTTTTTGAGTTTGCAATACCGTCAATTATTGTTGTCGTTCCCTGAGAATC
CGTTGCCGATTGTTTTTGTGGTTATTGCAATCAGTCTACTGGTACTAGTGTCCGGAAGAATTGCGACTTATCTAGAAGAA
GCTGATCAAATCTTCCTATTGACCAAGGAAAAAGACATTCTGCAAGGACTCGAGGTTGCAGCCAGATGCACGGTCTTGTT
TTGGTCCTCTATACAGGTGGTGGTTCAGCTTGTTTTGTTACCAATCTATTTGAAACTGGGTTTACCGGTGTGGATGATTG
TAGCTGGTCTTCTTACTTTGTTGGTTTTAAAATGTCTTTTTGTCAAGCGCCAATTAGTGGCTTATCAGTCACAGGGAGTA
TTGGACTGGTCTAAGGCTATTCAAGATGAACAAAAAAGGAAACAGTCTATTTTACGTTTCTTTGCCTTATTTACGACGGT
TAAAGGAATCAGTACGACTGTTAAACCGAGAAGCTATCTCAATGGAATCTTGCGTCTTGTCAAGTCGAGACAGACTTGGT
TTTATCTCTACTTACGGGCTTTCTTGCGTTCAGGAGACTACTTGGGCTTGACGATACGTCTACTGTTGTTGGCGATTTTG
TCCCTATTTGCCATTGAAGAATCGTGGTTATCCATCGGCCTAGTTTTAGTCTTTCATTATTTGCTTGTCTTTCAGTTGTT
GGGGCTTTACAAGCATTATGATTATCAATATATAACACAACTGTATCCTCTGGAGAAAGATTCCAAGAAAATTGGTCTTC
AGAATTTGCTTAGAGTGATTTTATATAGTCTATTACTGGTGGAATTGGGCTTTGCTCTGCTATTTTCTAAAGAGAATACG
ATGGTAGTCGTCTTACTTCTCGTGGGGATTTTCTTGCATGAAATATATTTGCCTCTAAAATTAAAAAAATTGATTGACTA
A
ATGAAAGAATTGTTTCAACAACGCCGACTAGATTTTTTAAATCGTTGTTCCAAGTATCTGCGCTATGTTCTGAATGACCA
TTTTGTTTTGGTTCTCATGGTTTTATTAGGCTTTTTGAGTTTGCAATACCGTCAATTATTGTTGTCGTTCCCTGAGAATC
CGTTGCCGATTGTTTTTGTGGTTATTGCAATCAGTCTACTGGTACTAGTGTCCGGAAGAATTGCGACTTATCTAGAAGAA
GCTGATCAAATCTTCCTATTGACCAAGGAAAAAGACATTCTGCAAGGACTCGAGGTTGCAGCCAGATGCACGGTCTTGTT
TTGGTCCTCTATACAGGTGGTGGTTCAGCTTGTTTTGTTACCAATCTATTTGAAACTGGGTTTACCGGTGTGGATGATTG
TAGCTGGTCTTCTTACTTTGTTGGTTTTAAAATGTCTTTTTGTCAAGCGCCAATTAGTGGCTTATCAGTCACAGGGAGTA
TTGGACTGGTCTAAGGCTATTCAAGATGAACAAAAAAGGAAACAGTCTATTTTACGTTTCTTTGCCTTATTTACGACGGT
TAAAGGAATCAGTACGACTGTTAAACCGAGAAGCTATCTCAATGGAATCTTGCGTCTTGTCAAGTCGAGACAGACTTGGT
TTTATCTCTACTTACGGGCTTTCTTGCGTTCAGGAGACTACTTGGGCTTGACGATACGTCTACTGTTGTTGGCGATTTTG
TCCCTATTTGCCATTGAAGAATCGTGGTTATCCATCGGCCTAGTTTTAGTCTTTCATTATTTGCTTGTCTTTCAGTTGTT
GGGGCTTTACAAGCATTATGATTATCAATATATAACACAACTGTATCCTCTGGAGAAAGATTCCAAGAAAATTGGTCTTC
AGAATTTGCTTAGAGTGATTTTATATAGTCTATTACTGGTGGAATTGGGCTTTGCTCTGCTATTTTCTAAAGAGAATACG
ATGGTAGTCGTCTTACTTCTCGTGGGGATTTTCTTGCATGAAATATATTTGCCTCTAAAATTAAAAAAATTGATTGACTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pptB | Streptococcus salivarius strain HSISS4 |
45.739 |
100 |
0.465 |
| pptB | Streptococcus thermophilus LMD-9 |
44.886 |
100 |
0.457 |