Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   BTR42_RS09210 Genome accession   NZ_CP018822
Coordinates   1861118..1862119 (-) Length   333 a.a.
NCBI ID   WP_009854678.1    Uniprot ID   A0A139R5I1
Organism   Streptococcus gallolyticus subsp. gallolyticus DSM 16831     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1856118..1867119
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTR42_RS09195 (BTR42_08915) thrS 1856392..1858338 (-) 1947 WP_077497425.1 threonine--tRNA ligase -
  BTR42_RS09200 (BTR42_08920) - 1858688..1860022 (-) 1335 WP_009854676.1 glycosyltransferase family 4 protein -
  BTR42_RS09205 (BTR42_08925) - 1860024..1861022 (-) 999 WP_039695067.1 glycosyltransferase family 4 protein -
  BTR42_RS09210 (BTR42_08930) ccpA 1861118..1862119 (-) 1002 WP_009854678.1 catabolite control protein A Regulator
  BTR42_RS09215 (BTR42_08935) - 1862447..1863532 (+) 1086 WP_077497427.1 M24 family metallopeptidase -
  BTR42_RS09220 (BTR42_08940) - 1863566..1863892 (-) 327 WP_009854680.1 DMT family transporter -
  BTR42_RS09225 (BTR42_08945) - 1864142..1864639 (+) 498 WP_039695064.1 NAD(+) diphosphatase -
  BTR42_RS09230 (BTR42_08950) - 1864691..1866457 (-) 1767 WP_077497431.1 hypothetical protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36497.48 Da        Isoelectric Point: 5.0313

>NTDB_id=210649 BTR42_RS09210 WP_009854678.1 1861118..1862119(-) (ccpA) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVADVVDILAKNNKEIAFVSGPLIDDINGKVRLAGYKEGLEKNGLSFKEGLVFEANYNYKDGFELAQRVINSG
ATAAFVAEDELAAGLLNGLFEAGKKVPEDFEIITSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGLTTRGTTR

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=210649 BTR42_RS09210 WP_009854678.1 1861118..1862119(-) (ccpA) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
ATGAACACTGATGATACGATTACAATTTATGACGTTGCCCGAGAAGCAGGCGTCTCTATGGCAACAGTTAGTCGTGTTGT
AAATGGCAATAAAAACGTAAAGGAAAACACACGTAAAAAAGTCCTTGAAGTTATTGATCGTTTGGATTATCGTCCAAATG
CCGTTGCCCGCGGTTTAGCAAGTAAAAAGACAACAACAGTAGGTGTTGTTATCCCTAATATTGCTAACAGCTATTTCTCA
ATTCTTGCTAAAGGGATTGATGATATTGCCGCTATGTACAAGTACAATATCGTACTTGCTTCAAGTGATGAAGATGATGA
TAAGGAAGTTAACGTTGTTAACACCTTGTTTGCTAAACAAGTTGACGGTATTATCTTCATGGGACATCATTTGACTGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACGCCAGTTGTACTTGCGGGTACAGTTGACTTAGAACACCAACTCCCAAGT
GTTAATATTGACTACAAAGCAGCCGTTGCTGATGTTGTTGATATTTTGGCTAAAAACAATAAAGAAATCGCCTTTGTTTC
TGGTCCACTTATCGATGATATCAACGGTAAAGTGCGTTTAGCTGGTTACAAAGAAGGTCTTGAAAAAAATGGCTTATCAT
TCAAAGAAGGTCTTGTCTTTGAAGCTAATTACAACTATAAAGATGGATTTGAACTTGCACAACGTGTGATTAATTCTGGT
GCAACAGCAGCCTTTGTTGCCGAAGATGAATTGGCAGCAGGATTGTTGAATGGCTTGTTCGAAGCTGGCAAAAAAGTTCC
AGAAGACTTTGAAATCATCACAAGCAATGATTCACCAATCACATCATACACACGTCCAAACCTTAGCTCAATCAGCCAAC
CAGTTTATGACCTTGGTGCTGTCAGCATGCGTATGTTGACTAAAATCATGAACAAAGAGGAACTCGAAGAAAAAGAAATT
CTTCTTAACCACGGTCTTACAACACGTGGCACAACACGTTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A139R5I1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

80.48

100

0.805
  ccpA Streptococcus pneumoniae D39

78.378

100

0.784
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556

Multiple sequence alignment