Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | BTV17_RS07955 | Genome accession | NZ_CP018806 |
| Coordinates | 1726114..1727220 (-) | Length | 368 a.a. |
| NCBI ID | WP_075294326.1 | Uniprot ID | - |
| Organism | Histophilus somni strain USDA-ARS-USMARC-63370 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1721114..1732220
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BTV17_RS07935 (BTV17_07920) | rpsT | 1721847..1722110 (-) | 264 | WP_011608572.1 | 30S ribosomal protein S20 | - |
| BTV17_RS07940 (BTV17_07925) | murJ | 1722388..1723959 (+) | 1572 | WP_075294324.1 | murein biosynthesis integral membrane protein MurJ | - |
| BTV17_RS07945 (BTV17_07930) | ftsY | 1724122..1725465 (-) | 1344 | WP_075294325.1 | signal recognition particle-docking protein FtsY | - |
| BTV17_RS07950 (BTV17_07935) | rsmD | 1725529..1726131 (+) | 603 | WP_011608569.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| BTV17_RS07955 (BTV17_07940) | dprA | 1726114..1727220 (-) | 1107 | WP_075294326.1 | DNA-processing protein DprA | Machinery gene |
| BTV17_RS07960 (BTV17_07945) | tsaD | 1727456..1728484 (+) | 1029 | WP_011608567.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| BTV17_RS07965 (BTV17_07950) | - | 1728546..1729133 (+) | 588 | WP_011608566.1 | thymidine kinase | - |
| BTV17_RS07970 (BTV17_07955) | - | 1729294..1729965 (+) | 672 | WP_011608565.1 | trimeric intracellular cation channel family protein | - |
| BTV17_RS07975 (BTV17_07960) | proA | 1729975..1731231 (+) | 1257 | WP_011608564.1 | glutamate-5-semialdehyde dehydrogenase | - |
| BTV17_RS10150 | - | 1731293..1731367 (+) | 75 | Protein_1551 | aspartate kinase | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 41519.72 Da Isoelectric Point: 6.5011
>NTDB_id=210460 BTV17_RS07955 WP_075294326.1 1726114..1727220(-) (dprA) [Histophilus somni strain USDA-ARS-USMARC-63370]
MDKRNELLLRLLQVPKLGASGITQLLSHIDLKTLEDYDDVAFHYLGWKPEQINRWLYPDLRYIEPALFWASKKGHYLMNF
YQENYPYLLKQTIGAPPLLFIKGNPEILAQQQVAIVGSRHCSHYGEYWAKYFATELFLAGFVITSGLALGIDGFCHQAVV
DIQGQTIGVLGGGLEELYPKQHKKLAQQMLDYGGALVSEFLPHQPPKPQHFPQRNRIISGLSKGVLVVEATEKSGSLITA
RYALEQNREVFALPGQIQNEYSQGCHRLIKDGALLVENVADIVENLSPFTHYERQLTAKQIETQFPPAYKLPASPTYPEL
YAHIGYTPVGLDELSNKSGLSVDTLLIQLLELELQDLVIAEKGLYRRT
MDKRNELLLRLLQVPKLGASGITQLLSHIDLKTLEDYDDVAFHYLGWKPEQINRWLYPDLRYIEPALFWASKKGHYLMNF
YQENYPYLLKQTIGAPPLLFIKGNPEILAQQQVAIVGSRHCSHYGEYWAKYFATELFLAGFVITSGLALGIDGFCHQAVV
DIQGQTIGVLGGGLEELYPKQHKKLAQQMLDYGGALVSEFLPHQPPKPQHFPQRNRIISGLSKGVLVVEATEKSGSLITA
RYALEQNREVFALPGQIQNEYSQGCHRLIKDGALLVENVADIVENLSPFTHYERQLTAKQIETQFPPAYKLPASPTYPEL
YAHIGYTPVGLDELSNKSGLSVDTLLIQLLELELQDLVIAEKGLYRRT
Nucleotide
Download Length: 1107 bp
>NTDB_id=210460 BTV17_RS07955 WP_075294326.1 1726114..1727220(-) (dprA) [Histophilus somni strain USDA-ARS-USMARC-63370]
ATGGATAAACGGAATGAGCTGTTACTGCGTTTGTTACAAGTGCCGAAGTTGGGAGCGTCCGGAATAACTCAACTTTTATC
ACACATCGATTTAAAAACATTAGAGGATTATGATGATGTTGCGTTTCATTATTTAGGCTGGAAACCTGAACAGATAAATA
GATGGTTGTATCCGGATCTTAGATATATTGAACCTGCATTATTTTGGGCAAGCAAAAAGGGACATTATTTGATGAATTTC
TATCAAGAGAATTACCCTTATTTATTAAAGCAAACCATAGGTGCTCCCCCTTTGTTATTTATCAAAGGCAATCCGGAAAT
ACTTGCTCAACAACAAGTCGCTATTGTAGGAAGCCGTCATTGCTCACATTATGGCGAGTATTGGGCAAAGTATTTTGCAA
CGGAATTGTTCCTTGCCGGTTTTGTTATTACCAGTGGACTGGCTCTAGGGATAGACGGTTTTTGTCATCAGGCTGTTGTG
GATATTCAAGGACAAACTATCGGGGTATTAGGGGGAGGTTTGGAAGAGTTGTATCCCAAACAACATAAAAAATTAGCACA
ACAAATGCTAGATTATGGCGGTGCGTTAGTGTCAGAATTTTTACCTCATCAGCCTCCCAAACCACAACATTTTCCTCAAC
GTAATCGCATTATTAGCGGACTTTCTAAAGGTGTTTTAGTGGTTGAGGCAACAGAAAAAAGCGGTTCACTCATTACTGCA
CGTTATGCTTTAGAACAAAATAGAGAAGTTTTTGCACTTCCAGGACAAATTCAAAATGAGTATAGTCAAGGGTGTCATAG
ATTAATAAAAGACGGTGCGTTGTTAGTAGAGAATGTTGCAGATATTGTAGAAAATTTATCGCCTTTTACGCATTATGAAC
GTCAACTAACAGCAAAACAGATAGAAACGCAATTTCCGCCGGCTTATAAGTTACCTGCTTCACCGACTTATCCTGAACTC
TATGCCCATATTGGTTATACGCCGGTAGGGCTTGATGAATTATCAAATAAAAGCGGATTAAGTGTAGATACCTTATTGAT
ACAGCTGTTAGAACTTGAATTGCAAGATCTCGTTATTGCTGAAAAAGGGTTATATCGACGGACTTAA
ATGGATAAACGGAATGAGCTGTTACTGCGTTTGTTACAAGTGCCGAAGTTGGGAGCGTCCGGAATAACTCAACTTTTATC
ACACATCGATTTAAAAACATTAGAGGATTATGATGATGTTGCGTTTCATTATTTAGGCTGGAAACCTGAACAGATAAATA
GATGGTTGTATCCGGATCTTAGATATATTGAACCTGCATTATTTTGGGCAAGCAAAAAGGGACATTATTTGATGAATTTC
TATCAAGAGAATTACCCTTATTTATTAAAGCAAACCATAGGTGCTCCCCCTTTGTTATTTATCAAAGGCAATCCGGAAAT
ACTTGCTCAACAACAAGTCGCTATTGTAGGAAGCCGTCATTGCTCACATTATGGCGAGTATTGGGCAAAGTATTTTGCAA
CGGAATTGTTCCTTGCCGGTTTTGTTATTACCAGTGGACTGGCTCTAGGGATAGACGGTTTTTGTCATCAGGCTGTTGTG
GATATTCAAGGACAAACTATCGGGGTATTAGGGGGAGGTTTGGAAGAGTTGTATCCCAAACAACATAAAAAATTAGCACA
ACAAATGCTAGATTATGGCGGTGCGTTAGTGTCAGAATTTTTACCTCATCAGCCTCCCAAACCACAACATTTTCCTCAAC
GTAATCGCATTATTAGCGGACTTTCTAAAGGTGTTTTAGTGGTTGAGGCAACAGAAAAAAGCGGTTCACTCATTACTGCA
CGTTATGCTTTAGAACAAAATAGAGAAGTTTTTGCACTTCCAGGACAAATTCAAAATGAGTATAGTCAAGGGTGTCATAG
ATTAATAAAAGACGGTGCGTTGTTAGTAGAGAATGTTGCAGATATTGTAGAAAATTTATCGCCTTTTACGCATTATGAAC
GTCAACTAACAGCAAAACAGATAGAAACGCAATTTCCGCCGGCTTATAAGTTACCTGCTTCACCGACTTATCCTGAACTC
TATGCCCATATTGGTTATACGCCGGTAGGGCTTGATGAATTATCAAATAAAAGCGGATTAAGTGTAGATACCTTATTGAT
ACAGCTGTTAGAACTTGAATTGCAAGATCTCGTTATTGCTGAAAAAGGGTTATATCGACGGACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Haemophilus influenzae Rd KW20 |
61.126 |
100 |
0.62 |
| dprA | Glaesserella parasuis strain SC1401 |
50.432 |
94.293 |
0.476 |
| dprA | Vibrio cholerae strain A1552 |
44.986 |
100 |
0.451 |
| dprA | Vibrio campbellii strain DS40M4 |
41.096 |
99.185 |
0.408 |
| dprA | Legionella pneumophila strain ERS1305867 |
38.798 |
99.457 |
0.386 |