Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | BG259_RS10705 | Genome accession | NZ_CP018680 |
| Coordinates | 2237423..2238067 (+) | Length | 214 a.a. |
| NCBI ID | WP_009698824.1 | Uniprot ID | A0A9X3RX18 |
| Organism | Vibrio harveyi strain QT520 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2232423..2243067
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG259_RS10690 (BG259_10690) | - | 2232868..2234316 (-) | 1449 | WP_005444325.1 | MSHA biogenesis protein MshI | - |
| BG259_RS10695 (BG259_10695) | csrD | 2234328..2236337 (-) | 2010 | WP_009698823.1 | RNase E specificity factor CsrD | - |
| BG259_RS10700 (BG259_10700) | ssb | 2236589..2237128 (-) | 540 | WP_005444320.1 | single-stranded DNA-binding protein | Machinery gene |
| BG259_RS10705 (BG259_10705) | qstR | 2237423..2238067 (+) | 645 | WP_009698824.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| BG259_RS10710 (BG259_10710) | galU | 2238229..2239101 (+) | 873 | WP_005444317.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| BG259_RS10715 (BG259_10715) | uvrA | 2239239..2242061 (+) | 2823 | WP_074050849.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24591.43 Da Isoelectric Point: 8.7703
>NTDB_id=209642 BG259_RS10705 WP_009698824.1 2237423..2238067(+) (qstR) [Vibrio harveyi strain QT520]
MKKSAYARKLFLISMEDDAEKKVEALVKYTDIDIPVISTQALMEANPKHRNKILLIDFSEHKTLVQSIKNLPLIWKNFET
VIFNVPKRLTTDELLSFGQLKGVFYQEDSLEQVGEGLREIVNGQNWLPRNVTSQLLHYYRNVLSTHTAPATVDLTIRELQ
VLRCLQAGASNNQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLLS
MKKSAYARKLFLISMEDDAEKKVEALVKYTDIDIPVISTQALMEANPKHRNKILLIDFSEHKTLVQSIKNLPLIWKNFET
VIFNVPKRLTTDELLSFGQLKGVFYQEDSLEQVGEGLREIVNGQNWLPRNVTSQLLHYYRNVLSTHTAPATVDLTIRELQ
VLRCLQAGASNNQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLLS
Nucleotide
Download Length: 645 bp
>NTDB_id=209642 BG259_RS10705 WP_009698824.1 2237423..2238067(+) (qstR) [Vibrio harveyi strain QT520]
GTGAAAAAATCAGCTTATGCGAGAAAATTGTTTTTGATCAGTATGGAAGACGACGCAGAGAAAAAAGTCGAAGCGCTCGT
GAAATACACTGATATTGATATCCCTGTCATCTCCACACAAGCACTGATGGAAGCCAACCCAAAGCATCGCAATAAAATCC
TGTTGATTGACTTTAGTGAACATAAAACACTCGTACAATCGATCAAAAACTTGCCTTTAATTTGGAAGAATTTTGAAACG
GTCATATTCAATGTTCCTAAACGCTTAACCACCGATGAGTTGTTGTCTTTTGGGCAACTAAAAGGCGTATTTTATCAGGA
AGACTCTCTAGAGCAGGTAGGTGAAGGCTTGAGAGAAATCGTGAATGGTCAGAACTGGTTGCCAAGAAATGTCACTAGTC
AATTGCTTCACTATTATCGCAATGTCCTCAGCACGCACACCGCCCCAGCAACCGTGGACTTAACCATCCGTGAGTTGCAA
GTTTTACGTTGTCTTCAAGCAGGAGCATCTAACAATCAAATGGCAGAAGAATTGTTCGTCAGTGAATTCACCATTAAATC
TCACCTTTATCAGATATTCAAAAAGCTCTCCGTAAAGAATCGCGTTCAAGCTATCGCTTGGGCAGACCAAAACCTGTTGT
CATAA
GTGAAAAAATCAGCTTATGCGAGAAAATTGTTTTTGATCAGTATGGAAGACGACGCAGAGAAAAAAGTCGAAGCGCTCGT
GAAATACACTGATATTGATATCCCTGTCATCTCCACACAAGCACTGATGGAAGCCAACCCAAAGCATCGCAATAAAATCC
TGTTGATTGACTTTAGTGAACATAAAACACTCGTACAATCGATCAAAAACTTGCCTTTAATTTGGAAGAATTTTGAAACG
GTCATATTCAATGTTCCTAAACGCTTAACCACCGATGAGTTGTTGTCTTTTGGGCAACTAAAAGGCGTATTTTATCAGGA
AGACTCTCTAGAGCAGGTAGGTGAAGGCTTGAGAGAAATCGTGAATGGTCAGAACTGGTTGCCAAGAAATGTCACTAGTC
AATTGCTTCACTATTATCGCAATGTCCTCAGCACGCACACCGCCCCAGCAACCGTGGACTTAACCATCCGTGAGTTGCAA
GTTTTACGTTGTCTTCAAGCAGGAGCATCTAACAATCAAATGGCAGAAGAATTGTTCGTCAGTGAATTCACCATTAAATC
TCACCTTTATCAGATATTCAAAAAGCTCTCCGTAAAGAATCGCGTTCAAGCTATCGCTTGGGCAGACCAAAACCTGTTGT
CATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio campbellii strain DS40M4 |
92.991 |
100 |
0.93 |
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
88.785 |
100 |
0.888 |
| qstR | Vibrio cholerae strain A1552 |
52.336 |
100 |
0.523 |