Detailed information NTG0208974

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BS467_RS07060
• Genome accession: NZ_CP018574
• Coordinates: 1400851..1402026 (+)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain GLB197
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1395851..1407026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BS467_RS07040 (BS467_07045)	tuaH	1396399..1397646 (+)	1248	WP_051632364.1	teichuronic acid biosynthesis protein TuaH	-
BS467_RS07045 (BS467_07050)	-	1397781..1398848 (+)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
BS467_RS07050 (BS467_07055)	-	1398885..1399976 (-)	1092	WP_025208065.1	LCP family protein	-
BS467_RS07055 (BS467_07060)	-	1399961..1400629 (-)	669	WP_017357860.1	YigZ family protein	-
BS467_RS07060 (BS467_07065)	degS	1400851..1402026 (+)	1176	WP_003213166.1	sensor histidine kinase	Regulator
BS467_RS07065 (BS467_07070)	degU	1402091..1402780 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
BS467_RS07070 (BS467_07075)	-	1402992..1403834 (+)	843	WP_024719242.1	DegV family protein	-
BS467_RS07075 (BS467_07080)	comFA	1403954..1405333 (+)	1380	WP_136944704.1	DEAD/DEAH box helicase	Machinery gene
BS467_RS07080 (BS467_07085)	-	1405398..1405691 (+)	294	WP_035701582.1	late competence development ComFB family protein	-
BS467_RS07085 (BS467_07090)	-	1405652..1406374 (+)	723	WP_390308590.1	ComF family protein	-
BS467_RS07090 (BS467_07095)	-	1406431..1406850 (+)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=208974 BS467_RS07060 WP_003213166.1 1400851..1402026(+) (degS) [Bacillus altitudinis strain GLB197]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=208974 BS467_RS07060 WP_003213166.1 1400851..1402026(+) (degS) [Bacillus altitudinis strain GLB197]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTCATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGTTTATCTGAAGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGAATTTTTAGAGACCGTG
GAACAGAAGAAGGATTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCTTAGGTGATACTGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841