Detailed information NTG0208692

Bioinformatically predicted

Overview

• Name: comP
• Type: Machinery gene
• Locus tag: CQR34_RS12865
• Genome accession: NZ_CP023814
• Coordinates: 2177838..2178287 (-)
• Length: 149 a.a.
• NCBI ID: WP_002221685.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain M26417
• Function: DNA binding; DNA uptake; receptor of DNA uptake sequence (DUS) (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2172838..2183287

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CQR34_RS12840 (CQR34_12840)	-	2174124..2175179 (-)	1056	WP_002221681.1	DNA cytosine methyltransferase	-
CQR34_RS14110	-	2175585..2175710 (-)	126	Protein_2140	IS5/IS1182 family transposase	-
CQR34_RS12850 (CQR34_12850)	-	2175800..2176765 (+)	966	WP_002221064.1	IS30-like element IS1655 family transposase	-
CQR34_RS12855 (CQR34_12855)	-	2176791..2177141 (-)	351	Protein_2142	IS5/IS1182 family transposase	-
CQR34_RS15215 (CQR34_12860)	-	2177480..2177748 (+)	269	Protein_2143	5'-nucleotidase	-
CQR34_RS12865 (CQR34_12865)	comP	2177838..2178287 (-)	450	WP_002221685.1	type IV pilin protein	Machinery gene
CQR34_RS12870 (CQR34_12870)	comE	2178375..2178839 (-)	465	WP_011799029.1	helix-hairpin-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 149 a.a.
• Molecular weight: 16848.83 Da
• Isoelectric Point: 9.7951

>NTDB_id=208692 CQR34_RS12865 WP_002221685.1 2177838..2178287(-) (comP) [Neisseria meningitidis strain M26417]
MTDNRGFTLVELISVVLILSVLALIVYPSYRNYIEKAKINAVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEG
FCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK

Nucleotide

• Length: 450 bp

>NTDB_id=208692 CQR34_RS12865 WP_002221685.1 2177838..2178287(-) (comP) [Neisseria meningitidis strain M26417]
ATGACTGATAATCGGGGGTTTACGCTGGTTGAATTAATATCAGTGGTCTTGATATTGTCTGTACTTGCTTTAATTGTTTA
TCCGAGCTATCGCAATTATATTGAGAAAGCAAAGATAAATGCAGTGCGGGCAGCCTTGTTAGAAAATGCACATTTTATGG
AAAAGTTTTATCTGCAGAATGGGAGATTTAAACAAACATCTACCAAATGGCCAAGTTTGCCGATTAAAGAGGCAGAAGGC
TTTTGTATCCGTTTGAATGGAATCGCGCGCGGGGCCTTAGACAGTAAATTCATGTTGAAGGCGGTAGCCATAGATAAAGA
TAAAAATCCTTTTATTATTAAGATGAATGAAAATCTAGTAACCTTTATTTGCAAGAAGTCCGCCAGTTCGTGTAGTGACG
GGCTGGATTATTTTAAAGGAAATGATAAGGACTGCAAGTTACTTAAGTAG

Domains

Predicted by InterProScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (28-107)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comP	Neisseria gonorrhoeae MS11	99.329	100	0.993
comP	Neisseria meningitidis 8013	98.658	100	0.987
comP	Neisseria subflava NJ9703	48.98	98.658	0.483