Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   BSR56_RS09315 Genome accession   NZ_CP018260
Coordinates   1905782..1906489 (+) Length   235 a.a.
NCBI ID   WP_005082645.1    Uniprot ID   A0A5P1UT60
Organism   Acinetobacter haemolyticus strain XH900     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1900782..1911489
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR56_RS09295 (BSR56_09410) - 1901107..1901532 (-) 426 WP_004639475.1 hypothetical protein -
  BSR56_RS09300 (BSR56_09415) clpB 1901702..1904269 (-) 2568 WP_100833750.1 ATP-dependent chaperone ClpB -
  BSR56_RS09305 (BSR56_09420) - 1904348..1905148 (+) 801 WP_035375225.1 peptidoglycan DD-metalloendopeptidase family protein -
  BSR56_RS09310 (BSR56_09425) - 1905213..1905635 (-) 423 WP_004639481.1 OsmC family protein -
  BSR56_RS09315 (BSR56_09430) crp 1905782..1906489 (+) 708 WP_005082645.1 cAMP-activated global transcriptional regulator CRP Regulator
  BSR56_RS09320 (BSR56_09435) - 1906692..1907471 (+) 780 WP_100833751.1 M48 family metallopeptidase -
  BSR56_RS09325 (BSR56_09440) - 1907642..1908571 (+) 930 WP_004907081.1 IS5-like element ISAba10 family transposase -
  BSR56_RS09330 (BSR56_09445) - 1908583..1910160 (-) 1578 Protein_1809 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha -
  BSR56_RS09335 (BSR56_09450) - 1910262..1911143 (+) 882 WP_004282326.1 IS982-like element ISAba9 family transposase -
  BSR56_RS09340 (BSR56_09455) - 1911153..1911269 (-) 117 Protein_1811 biotin carboxylase N-terminal domain-containing protein -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26618.22 Da        Isoelectric Point: 4.8321

>NTDB_id=207827 BSR56_RS09315 WP_005082645.1 1905782..1906489(+) (crp) [Acinetobacter haemolyticus strain XH900]
MTSNFSHLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESRSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEKNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSAQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFDASLEENTFPEDEYDDED

Nucleotide


Download         Length: 708 bp        

>NTDB_id=207827 BSR56_RS09315 WP_005082645.1 1905782..1906489(+) (crp) [Acinetobacter haemolyticus strain XH900]
ATGACTTCAAATTTTTCACATCTTAGCACTGATGCTTTGTCTCCAGGCCAACTACCTGAATCAGTAAAAGCTTTGCTAAA
ACGTGCTCATATTAACAGATACCCTAAACGCACCACGATTGTTGACGCTGGAACGGAATCAAGATCACTGTATTTAATTT
TAAAAGGTTCAGTATCAATTATTTTACGTGAAGATGATGAACGTGAAATCGTTGTTGCTTATTTGAACCCTGGGGACTTC
TTTGGTGAGATGGGTCTTTTTGAAAAGAACCCTCAACGTACTGCTGAAGTACGCACTCGAGATGTATGCGAAATTGCAGA
GATTTCTTATGACAATTTCCATGAATTAAGTAAACAGTATCCTGATTTAAGTTACGCAGTATTTGCTCAACTGGTGCGTC
GTCTTAAAAACACAACTCGTAAAGTAACTGACCTTGCCTTTATCGACGTTTCAGGTCGTATTGCACGTTGCTTAATCGAC
TTATCTGCTCAACCAGAGGCAATGATTTTACCGAATGGTCGTCAGATTCGTATCACTCGTCAAGAGATTGGTCGTATTGT
CGGTTGCTCTCGTGAAATGGTTGGTCGTGTCCTCAAAACACTTGAAGACCAAGGCATGATCCAAACTGATGGTAAAGCAA
TTTTAATTTTTGATGCGTCTTTAGAGGAAAATACCTTTCCTGAAGATGAATATGATGATGAAGATTGA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Crp-like helix-turn-helix domain (HTH_Crp_2)

(152-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5P1UT60

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

93.617

100

0.936
  crp Vibrio cholerae strain A1552

47.573

87.66

0.417
  crp Haemophilus influenzae Rd KW20

49.231

82.979

0.409

Multiple sequence alignment