Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | L_RS11110 | Genome accession | NC_002662 |
| Coordinates | 2186070..2186366 (-) | Length | 98 a.a. |
| NCBI ID | WP_010906316.1 | Uniprot ID | A0A3N6L9Y1 |
| Organism | Lactococcus lactis subsp. lactis Il1403 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2181070..2191366
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L_RS11075 (L164789) | - | 2181360..2182226 (+) | 867 | WP_010906309.1 | RluA family pseudouridine synthase | - |
| L_RS11080 (L165709) | - | 2182265..2183074 (-) | 810 | WP_010906310.1 | metal ABC transporter permease | - |
| L_RS11085 (L166512) | - | 2183067..2183804 (-) | 738 | WP_010906311.1 | metal ABC transporter ATP-binding protein | - |
| L_RS11090 (L167426) | - | 2183981..2184823 (-) | 843 | WP_010906312.1 | metal ABC transporter substrate-binding protein | - |
| L_RS11095 (L168265) | - | 2184820..2185257 (-) | 438 | WP_010906313.1 | zinc-dependent MarR family transcriptional regulator | - |
| L_RS11100 (L168783) | comGG | 2185338..2185622 (-) | 285 | WP_010906314.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| L_RS11105 (L169106) | comGF | 2185661..2186107 (-) | 447 | WP_164752712.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| L_RS11110 (L169515) | comGE | 2186070..2186366 (-) | 297 | WP_010906316.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| L_RS11115 (L169783) | comGD | 2186338..2186754 (-) | 417 | WP_021216554.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| L_RS11120 (L0315) | comGC | 2186729..2187112 (-) | 384 | WP_010906318.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| L_RS11125 (L0314) | comGB | 2187126..2188199 (-) | 1074 | WP_010906319.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| L_RS11130 (L0313) | comGA | 2188093..2189031 (-) | 939 | WP_010906320.1 | competence type IV pilus ATPase ComGA | Machinery gene |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 11076.95 Da Isoelectric Point: 6.4684
>NTDB_id=20775 L_RS11110 WP_010906316.1 2186070..2186366(-) (comGE) [Lactococcus lactis subsp. lactis Il1403]
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMRLELQS
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMRLELQS
Nucleotide
Download Length: 297 bp
>NTDB_id=20775 L_RS11110 WP_010906316.1 2186070..2186366(-) (comGE) [Lactococcus lactis subsp. lactis Il1403]
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCACTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGAAAGGAAATTATGCGACTTGAACTTCAAAGTTAA
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCACTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGAAAGGAAATTATGCGACTTGAACTTCAAAGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
68.041 |
98.98 |
0.673 |