Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   CO204_RS01770 Genome accession   NZ_CP023477
Coordinates   338560..340575 (+) Length   671 a.a.
NCBI ID   WP_002278402.1    Uniprot ID   -
Organism   Streptococcus mutans strain LAR01     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 333560..345575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO204_RS01750 (CO204_01750) - 334580..335610 (+) 1031 Protein_308 3-deoxy-7-phosphoheptulonate synthase -
  CO204_RS01755 (CO204_01755) - 335612..336645 (+) 1034 Protein_309 3-deoxy-7-phosphoheptulonate synthase -
  CO204_RS01760 (CO204_01760) acpS 336915..337274 (+) 360 WP_002269702.1 holo-ACP synthase -
  CO204_RS01765 (CO204_01765) alr 337271..338386 (+) 1116 WP_002264942.1 alanine racemase -
  CO204_RS01770 (CO204_01770) recG/mmsA 338560..340575 (+) 2016 WP_002278402.1 ATP-dependent DNA helicase RecG Machinery gene
  CO204_RS01775 (CO204_01775) - 340718..340882 (-) 165 WP_002271772.1 hypothetical protein -
  CO204_RS01780 (CO204_01780) - 340908..341867 (-) 960 WP_002263467.1 asparaginase -
  CO204_RS01785 (CO204_01785) - 341940..343325 (+) 1386 WP_002268948.1 Cof-type HAD-IIB family hydrolase -
  CO204_RS01790 (CO204_01790) - 343603..344052 (-) 450 WP_002263469.1 universal stress protein -
  CO204_RS01795 (CO204_01795) - 344150..344686 (-) 537 WP_002263470.1 biotin transporter BioY -

Sequence

Protein


Download         Length: 671 a.a.        Molecular weight: 75301.18 Da        Isoelectric Point: 8.0554

>NTDB_id=207406 CO204_RS01770 WP_002278402.1 338560..340575(+) (recG/mmsA) [Streptococcus mutans strain LAR01]
MDLQSSLAVLKGLGPKSAEKFHKLGIYTIEDLLLYYPFRYEDFKAKSVLDLLDGEKAVVTGKVVTPANVQYYGFKRNRLS
FKIKQDEAVIAVSFFNQPYLQDKVELDQDIAIFGKWDQKKSALTGMKILAQVTDDIQPVYHVAQGISQSALIKAIQSAFE
AGYLRFLSENLPQVLLNKYRLLDRQTATRAMHFPKDLEEYKQALRRIKFEELFYFQLNLQVLKANNKSESNGLLITYDHD
QVAAKIAALPFALTNAQKRSLDEILADMKSGAHMNRLLQGDVGSGKTVIASLAMYAAYSAGLQSALMVPTEILAEQHYES
LRTLFPELSIALLTSGMKAAVRRSALAAIADGSVDMIVGTHALIQEGVDYHKLGLVITDEQHRFGVKQRRLFREKGENPD
VLMMTATPIPRTLAITAFGEMDVSLIDELPAGRKPIVTRWVKHEQLDKVLPWVKEQLKKKEQVYVISPLIEESETLDLKN
AVALEEDLKAYFASSANIALMHGRMKNDEKEAIMQAFKKGSIDILVSTTVIEVGVNVPNATIMIIMDADRFGLSQLHQLR
GRVGRGEKQSYTILVANPKTDTGKNRMRIMTKTTDGFVLAEEDLKMRGSGEIFGVRQSGIPEFQVADIVEDYPILEEARK
VASQIVAVKDWCQDKRWAILVQNLKQKEILD

Nucleotide


Download         Length: 2016 bp        

>NTDB_id=207406 CO204_RS01770 WP_002278402.1 338560..340575(+) (recG/mmsA) [Streptococcus mutans strain LAR01]
ATGGACTTACAGTCATCACTTGCGGTTTTAAAGGGATTAGGTCCTAAGTCTGCAGAAAAATTTCATAAATTAGGTATTTA
TACCATTGAGGATTTGTTGCTTTACTATCCTTTTCGTTATGAGGATTTTAAGGCAAAATCTGTTTTAGATTTGTTAGATG
GTGAAAAAGCTGTTGTTACTGGAAAAGTAGTGACACCAGCTAATGTACAATATTATGGGTTTAAACGCAATCGTCTATCT
TTTAAAATAAAACAAGATGAAGCTGTTATTGCTGTTTCTTTTTTTAATCAGCCTTATTTACAAGATAAGGTGGAGCTTGA
TCAGGATATTGCTATTTTTGGAAAATGGGATCAAAAGAAGTCAGCTCTTACGGGCATGAAGATTTTGGCTCAAGTGACAG
ATGATATACAGCCGGTTTATCATGTGGCACAAGGAATATCACAGTCAGCTCTGATTAAGGCTATTCAATCCGCTTTTGAA
GCTGGTTATTTACGCTTTTTATCTGAAAATTTACCGCAGGTTTTGCTTAATAAATATCGTTTGTTAGACAGACAAACAGC
TACGCGGGCTATGCATTTTCCGAAAGATTTGGAAGAATATAAACAAGCCTTGCGCCGCATCAAATTTGAGGAACTCTTTT
ATTTTCAACTCAATTTGCAGGTTCTTAAAGCAAATAATAAATCAGAATCAAATGGTCTGCTTATTACTTATGATCACGAT
CAAGTGGCTGCTAAAATAGCTGCTCTGCCTTTTGCCTTGACGAATGCCCAAAAAAGGAGCTTAGACGAAATTCTGGCAGA
TATGAAGTCTGGCGCTCATATGAATCGGCTTTTACAGGGAGATGTCGGTTCTGGTAAGACAGTCATTGCCAGTCTTGCTA
TGTATGCAGCCTATAGTGCAGGTCTGCAGTCTGCTTTGATGGTTCCTACGGAAATTTTAGCGGAACAACATTATGAAAGT
TTAAGGACTTTATTTCCTGAACTTTCAATTGCACTTTTGACGTCTGGAATGAAGGCTGCTGTAAGACGTTCAGCCTTAGC
AGCTATCGCTGATGGCTCAGTAGATATGATTGTTGGTACCCACGCTCTCATTCAAGAAGGTGTTGATTACCATAAATTAG
GCTTAGTTATTACGGATGAACAACATCGATTTGGTGTTAAGCAAAGGCGACTGTTTAGGGAAAAGGGAGAGAATCCTGAT
GTTCTCATGATGACAGCCACACCTATTCCTAGAACCTTGGCTATTACTGCCTTTGGCGAAATGGATGTTTCTCTTATTGA
TGAATTGCCAGCAGGTCGCAAACCGATTGTTACACGTTGGGTTAAGCATGAACAGTTAGATAAAGTTCTGCCTTGGGTTA
AAGAACAGCTCAAGAAAAAAGAACAAGTCTATGTCATTTCACCTTTGATTGAGGAGTCTGAAACCTTGGATTTGAAAAAT
GCTGTCGCTTTAGAAGAAGACTTAAAAGCTTATTTTGCGTCGTCTGCTAATATTGCTCTTATGCATGGTCGTATGAAAAA
TGATGAAAAAGAAGCCATTATGCAGGCTTTCAAAAAGGGCAGTATTGATATTCTGGTTTCAACAACTGTCATTGAAGTTG
GGGTCAATGTACCTAATGCTACGATTATGATTATTATGGATGCCGATCGTTTTGGTCTTAGTCAATTGCATCAATTACGA
GGACGTGTGGGACGTGGAGAAAAGCAATCCTATACCATTTTAGTTGCTAATCCTAAAACGGATACTGGGAAAAATCGCAT
GCGCATTATGACAAAAACAACAGATGGCTTTGTTTTGGCTGAAGAAGATTTAAAAATGCGTGGTTCAGGAGAAATTTTTG
GTGTTCGTCAATCTGGCATTCCTGAATTTCAGGTGGCTGATATTGTGGAAGATTACCCTATTTTAGAAGAGGCTAGAAAA
GTGGCTAGTCAAATTGTGGCCGTTAAAGATTGGTGTCAAGATAAGCGATGGGCAATTCTTGTGCAAAATCTTAAGCAAAA
AGAAATTTTGGATTAA

Domains

Predicted by InterProScan.

Helicase conserved C-terminal domain (Helicase_C)

(450-566)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(593-666)

DEAD/DEAH box helicase (DEAD)

(254-409)

RecG wedge domain (RecG_wedge)

(10-157)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

69.747

100

0.697
  recG/mmsA Streptococcus pneumoniae R36A

69.747

100

0.697
  recG Bacillus subtilis subsp. subtilis str. 168

49.777

100

0.499
  recG Neisseria meningitidis strain C311

39.816

97.317

0.387

Multiple sequence alignment