Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   BSL056_RS15990 Genome accession   NZ_CP018197
Coordinates   3077652..3079964 (-) Length   770 a.a.
NCBI ID   WP_073207243.1    Uniprot ID   -
Organism   Bacillus safensis strain KCTC 12796BP     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3072652..3084964
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSL056_RS15950 (BSL056_15975) - 3073056..3073487 (+) 432 WP_044332448.1 Na(+)/H(+) antiporter subunit B -
  BSL056_RS15955 (BSL056_15980) - 3073487..3073828 (+) 342 WP_024423316.1 Na(+)/H(+) antiporter subunit C -
  BSL056_RS15960 (BSL056_15985) - 3073821..3075299 (+) 1479 WP_073207239.1 Na+/H+ antiporter subunit D -
  BSL056_RS15965 (BSL056_15990) - 3075306..3075785 (+) 480 WP_024423318.1 Na+/H+ antiporter subunit E -
  BSL056_RS15970 (BSL056_15995) - 3075785..3076066 (+) 282 WP_024425942.1 Na(+)/H(+) antiporter subunit F1 -
  BSL056_RS15975 (BSL056_16000) mnhG 3076050..3076424 (+) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  BSL056_RS15980 (BSL056_16005) - 3076517..3076906 (-) 390 WP_044332441.1 hotdog fold thioesterase -
  BSL056_RS15985 (BSL056_16010) comA 3076930..3077571 (-) 642 WP_024423322.1 response regulator transcription factor Regulator
  BSL056_RS15990 (BSL056_16015) comP 3077652..3079964 (-) 2313 WP_073207243.1 ATP-binding protein Regulator
  BSL056_RS15995 (BSL056_16020) comX 3080018..3080188 (-) 171 WP_073207246.1 competence pheromone ComX -
  BSL056_RS16000 (BSL056_16025) - 3080185..3081099 (-) 915 WP_024423324.1 polyprenyl synthetase family protein -
  BSL056_RS16005 (BSL056_16030) degQ 3081251..3081391 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  BSL056_RS16010 (BSL056_16035) - 3081897..3082253 (+) 357 WP_052503035.1 hypothetical protein -
  BSL056_RS16015 (BSL056_16040) - 3082289..3083515 (-) 1227 WP_073207248.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89508.08 Da        Isoelectric Point: 7.5085

>NTDB_id=207047 BSL056_RS15990 WP_073207243.1 3077652..3079964(-) (comP) [Bacillus safensis strain KCTC 12796BP]
MKITYTKLSAFLVFLSFLFVIYVSYIYVFDIFNGARVAENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGEPANNKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYIIPLILYSICLFCIFFIIRINKEAQRKSAFLLVVFLLTICIGY
LSAGTSGIGERFSHYVITFCLSSVFVFYIHFIYQYFKEFDLHITTQKTIRFLYSLPIINLVIELFVPIDSAIARYMPSLN
LLFFFASIIMSFKVIINGMRKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLKYYGFLAITPTVFVVVTFYILQKPEDLKYTLKLALITYTLMLAVFYFKEILDFRFRLKRFSEKH
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIIEIDESTNDSKLWKEYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFIICCLSNIQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLDDLKQREANPAWLKKI
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNDQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKATQVLVMLICIKDQVVLHYEDD
GVGFDASHLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=207047 BSL056_RS15990 WP_073207243.1 3077652..3079964(-) (comP) [Bacillus safensis strain KCTC 12796BP]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTGGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTAGCGGAGAACAAGAACGGTCAAGCAGAAGTTGTCAAAGTTGAGTATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATCAATGGGGAACCTGCTAACAACAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTAAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATATAATTCCTCTCATCCTGTATTCAATTTGTTTATTTTGTATCTTCTTTA
TCATTCGAATTAACAAAGAGGCCCAACGAAAATCAGCATTTCTTTTAGTTGTATTTTTATTAACGATTTGTATCGGATAT
CTTAGTGCAGGTACTTCAGGTATTGGTGAAAGATTTAGCCATTATGTAATTACATTTTGTTTATCAAGTGTATTTGTCTT
TTATATTCATTTCATTTATCAATATTTCAAAGAGTTTGACCTGCATATAACGACTCAAAAAACAATTCGCTTTTTATATA
GTCTTCCTATAATTAATCTAGTAATAGAGTTATTTGTTCCGATTGATTCAGCGATAGCCAGATACATGCCAAGTTTAAAT
CTTTTATTCTTTTTCGCTTCTATTATCATGTCATTCAAAGTGATTATCAATGGAATGCGGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATAAATATCATAGCATTTTGTCCATTTATCTTTTTATTTGCAATTCCATATG
TTTTGTTTCGTATTTATGTTGTAGATCCCTTTTTCTTAACTTCTTTTGTCTTGCTCATTCCTTTTTCACTCGTGTATCAA
TTTATGACGAACAAGCTTTACAATATGGATTTTTTGATAAGCAGACTGAAATACTATGGGTTTCTTGCCATTACACCGAC
CGTTTTTGTTGTTGTCACGTTTTACATTCTGCAAAAACCAGAAGATTTGAAGTACACATTGAAGCTCGCATTAATCACCT
ATACACTCATGTTGGCTGTTTTCTATTTCAAAGAAATTCTAGATTTCCGTTTTCGTCTGAAGCGTTTTTCAGAGAAGCAT
AATTACCAGGACAGCGTGTTTAAATTCACGCAGCTCATTCGTGAGGCGTCATCACTTCATCAAGTGCTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTTGTTGTGAATAAAGCCTTTGTGCTTGAGGTGAAAGCTGACGGACAAATTATTGAAATTG
ATGAATCAACAAATGATAGTAAGCTATGGAAAGAATACGTGGATCAATTTCAAGATATTTTAGGTGAAGTCGGGAAAATT
ATTGAGCTTGATAAAGGGTTTATGATGAAAATTGGCGAACGGGGCGGTCACTCGTTTATCATTTGCTGCTTATCCAATAT
ACAGACACCGAAATTAACGCGTGATGAGATTTCTTGGCTAAAAACATTAGCCTTTTATACAAGTGTCAGTTTAGAAAATG
TCGTCAAAATCGAAGAGTTGATGGAGCATCTTGATGATTTGAAACAGCGCGAGGCCAATCCTGCATGGCTGAAGAAAATC
ATGTTTGCTATGGAAGAAAAGCAGCGTTCAGATTTAGCGAGAGATCTTCATGATTCCGTGCTGCAGGACTTAATATCACT
AAAAAGGCAGTCGGAGATGTTTTTAACGAATTTCCAAAACAACCAATGCCCGACATCTATTGAAAATTCGCTTATCTCAT
GGAATGATCAAATGTCCAAAGTGATTCAAACGACGAGAGAAACGTGTCATGAGCTTCGCCCGCAGCTGCTGTATGATTTA
GGTTTAGTAAAGGCGATATCGAAGCTGACTTCTCAAATTCAGGAGGAAGCGCCGTTTCATATTAGGCTGAATACGACACG
CTTTGATAAAGAATTGGACATTGATATTGATTCACAGCTGAATATTTACCGAATTGTTCAGGAGCTGTTATCCAACGCCC
TGAAGCACTCAAAAGCCACTCAAGTGTTAGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTATGAGGATGAT
GGAGTCGGTTTTGATGCCAGTCATCTTGATCAGCACACAATGAGCATGGGGCTATCGGGAATTAGAGAACGAGTGAAAGC
GTTAAATGGAAAGCTTCAAATTCACACAGCCCCGGAAAAAGGGCTTAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.645

100

0.49


Multiple sequence alignment