Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   BSR20_RS02120 Genome accession   NZ_CP018189
Coordinates   395285..395728 (+) Length   147 a.a.
NCBI ID   WP_002885568.1    Uniprot ID   A0A0A1DW04
Organism   Streptococcus salivarius strain ICDC3     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 390285..400728
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR20_RS02105 (BSR20_02095) gdhA 391354..392706 (+) 1353 WP_002885547.1 NADP-specific glutamate dehydrogenase -
  BSR20_RS02110 (BSR20_02100) - 393281..394528 (+) 1248 WP_231593857.1 YfhO family protein -
  BSR20_RS02115 (BSR20_02105) - 394688..395098 (+) 411 WP_014633541.1 peptide deformylase -
  BSR20_RS02120 (BSR20_02110) rcrR 395285..395728 (+) 444 WP_002885568.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  BSR20_RS02125 (BSR20_02115) rcrP 395732..397546 (+) 1815 WP_070850533.1 ABC transporter ATP-binding protein Regulator
  BSR20_RS02130 (BSR20_02120) rcrQ 397536..399314 (+) 1779 WP_045769269.1 ABC transporter ATP-binding protein Regulator
  BSR20_RS02135 (BSR20_02125) - 399422..400045 (+) 624 WP_045769268.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17181.67 Da        Isoelectric Point: 9.3639

>NTDB_id=206902 BSR20_RS02120 WP_002885568.1 395285..395728(+) (rcrR) [Streptococcus salivarius strain ICDC3]
MHGKDTFSEFREFINTMESRVQELGKVHGVEHLAGPQGFAVKYLSDNQDKEIFIKDIEKRLCISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKARDVKHFREAIHEQLLEGISKEDAETAFRVFHQIRMNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=206902 BSR20_RS02120 WP_002885568.1 395285..395728(+) (rcrR) [Streptococcus salivarius strain ICDC3]
ATGCATGGAAAAGATACTTTTAGTGAATTCAGAGAATTCATCAATACTATGGAATCTCGCGTGCAAGAGTTAGGAAAGGT
CCATGGGGTTGAGCATTTAGCTGGCCCACAAGGATTTGCCGTCAAGTATTTGTCTGATAATCAAGATAAGGAAATTTTTA
TCAAGGACATTGAAAAAAGACTATGTATTTCTAAATCAGTGGCTAGTAATTTGGTCAAACGAATGGAAAAAAATGGTTTT
GTTGAGTTGGTGACATCGGACAAGGATAAACGCTACAAGTATGTTCATCTGACAGACTTAGGTAAAAAGAAAGCTCGAGA
TGTCAAACATTTTCGAGAGGCCATCCATGAACAGCTGTTAGAAGGTATTTCTAAAGAAGATGCTGAAACAGCCTTTCGTG
TCTTTCACCAAATTCGTATGAATTTAGAAAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(37-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A1DW04

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

58.156

95.918

0.558

Multiple sequence alignment