Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   BSR20_RS02125 Genome accession   NZ_CP018189
Coordinates   395732..397546 (+) Length   604 a.a.
NCBI ID   WP_070850533.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ICDC3     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 390732..402546
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR20_RS02105 (BSR20_02095) gdhA 391354..392706 (+) 1353 WP_002885547.1 NADP-specific glutamate dehydrogenase -
  BSR20_RS02110 (BSR20_02100) - 393281..394528 (+) 1248 WP_231593857.1 YfhO family protein -
  BSR20_RS02115 (BSR20_02105) - 394688..395098 (+) 411 WP_014633541.1 peptide deformylase -
  BSR20_RS02120 (BSR20_02110) rcrR 395285..395728 (+) 444 WP_002885568.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  BSR20_RS02125 (BSR20_02115) rcrP 395732..397546 (+) 1815 WP_070850533.1 ABC transporter ATP-binding protein Regulator
  BSR20_RS02130 (BSR20_02120) rcrQ 397536..399314 (+) 1779 WP_045769269.1 ABC transporter ATP-binding protein Regulator
  BSR20_RS02135 (BSR20_02125) - 399422..400045 (+) 624 WP_045769268.1 GNAT family N-acetyltransferase -
  BSR20_RS02140 (BSR20_02130) - 400193..400816 (+) 624 WP_156209468.1 GTP pyrophosphokinase family protein -
  BSR20_RS02145 (BSR20_02135) - 400818..401495 (+) 678 WP_038675394.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67085.73 Da        Isoelectric Point: 5.9436

>NTDB_id=206903 BSR20_RS02125 WP_070850533.1 395732..397546(+) (rcrP) [Streptococcus salivarius strain ICDC3]
MFKIFKRLTTKELIMIVLAVIFVCLNVYLNLKIPDYMSDITTLLSTKGTKASDIFAWNTDAPGMRMLLMSFAGFMASVVV
GFLAARSVASFTTRLRDDIFHQVLDFSDAEIKKFSIPSLLTRTTNDITQLQMVLTMGLQVITQGPIMAIWAITKIADKNG
NWLLALLVAVAVIAILMLFLLIMVMPKQRLIQTLTDKLNSVTRESLTGIRVVRAYNAESYQEDKFEKANTDLTQNNLFIG
RSFALLTPVMTAVSSGLTLAIYWIGAHLIEDVKIPTDPTKISGAMENKVHLFSDMVVYSSYAMQVVMGFMMMIIVFFLLP
RAVVAAGRINEVLDTQSSVSYPENSSEKPNEVGTVEFDDVSFRYSETSEPVLEHVSFKAKKGDTVAFIGSTGSGKSTLVN
LIPRFYDATQGTIKVDGVDVRHYDHETLHNIVGYIPQKAVLFSGDITSNMTMGTSNNSPLDDAKIWEALELAQGKDFVEN
KEGQLKAEVAQAGSNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRKLRQELAEKTQEMTKLIVAQRISTIMDA
DQILVLDQGKVVGQGTHKELLANNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=206903 BSR20_RS02125 WP_070850533.1 395732..397546(+) (rcrP) [Streptococcus salivarius strain ICDC3]
ATGTTTAAAATTTTTAAACGTTTGACGACAAAAGAGTTAATCATGATTGTCTTAGCGGTGATTTTTGTTTGCTTGAACGT
CTATCTAAACTTGAAAATTCCAGACTATATGTCTGATATTACGACACTCTTATCAACTAAGGGAACTAAAGCGTCGGATA
TTTTTGCCTGGAATACGGATGCCCCAGGGATGCGAATGCTTTTAATGTCATTTGCAGGCTTTATGGCCTCTGTAGTGGTT
GGTTTCTTAGCTGCCAGAAGCGTGGCAAGTTTTACCACCCGTCTTCGTGATGATATCTTCCATCAGGTTCTAGATTTTTC
AGATGCAGAGATTAAGAAATTCTCAATTCCTAGTCTTTTGACCCGTACGACAAATGATATTACCCAATTGCAGATGGTAC
TTACCATGGGGTTACAGGTTATTACACAGGGGCCTATCATGGCCATTTGGGCGATTACAAAGATTGCCGATAAAAATGGG
AACTGGCTCCTTGCCTTGCTTGTCGCTGTGGCAGTGATTGCCATTCTCATGCTCTTCCTCTTGATCATGGTTATGCCTAA
GCAACGCTTGATTCAAACTCTGACCGATAAACTGAATAGCGTAACGCGTGAATCTCTTACAGGAATTCGTGTGGTGCGTG
CCTATAACGCTGAAAGTTATCAAGAGGATAAATTTGAAAAGGCCAATACTGATTTGACCCAAAACAATCTCTTTATTGGT
CGTTCTTTTGCCTTACTGACACCGGTAATGACTGCTGTATCAAGTGGTTTGACACTGGCTATTTATTGGATTGGTGCACA
TTTGATTGAAGATGTTAAGATTCCAACAGATCCAACTAAGATTTCTGGTGCTATGGAAAATAAGGTCCATCTCTTCTCAG
ACATGGTGGTTTATTCATCTTATGCCATGCAGGTTGTTATGGGATTCATGATGATGATTATTGTTTTCTTCCTTCTTCCA
CGTGCAGTTGTAGCAGCTGGTCGTATCAATGAAGTTCTAGATACCCAATCTTCAGTCTCTTATCCTGAAAATAGTTCTGA
AAAGCCTAATGAAGTGGGTACTGTCGAATTTGATGATGTTTCCTTCCGTTATTCTGAAACTTCAGAGCCTGTTTTGGAGC
ATGTTAGCTTCAAAGCTAAAAAAGGTGACACGGTTGCCTTTATTGGTTCGACTGGATCTGGTAAATCAACGCTTGTCAAC
CTTATCCCACGTTTTTATGATGCCACGCAAGGAACGATCAAGGTTGACGGTGTCGATGTACGCCATTATGACCATGAAAC
CTTGCACAATATAGTCGGTTATATTCCACAGAAGGCTGTGCTTTTCTCAGGTGATATCACGTCAAATATGACGATGGGAA
CGAGCAATAACAGTCCCCTTGATGATGCTAAGATTTGGGAAGCTCTCGAATTGGCTCAAGGAAAAGACTTTGTTGAAAAT
AAAGAAGGTCAACTTAAAGCAGAAGTTGCCCAAGCTGGGTCTAACTTCTCAGGTGGACAGAAGCAACGTTTGGCTATTGC
GCGTGCCTTGGCACGTAAGCCTGAAATCTTGATTTTCGATGATTCCTTCTCAGCCTTGGACTATAAGACCGATCGTAAGT
TACGTCAAGAACTGGCTGAAAAAACGCAAGAGATGACCAAGTTGATTGTTGCTCAACGTATCTCTACTATTATGGATGCG
GACCAAATCTTGGTACTTGACCAAGGTAAGGTCGTTGGTCAAGGAACTCACAAGGAACTCTTGGCAAATAATGAGGTTTA
CCAAGAAATTGCCTATTCACAATTGTCTAAGGAGGAGTTAGAAAATGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-271)

ABC transporter (ABC_tran)

(372-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.099

100

0.682

Multiple sequence alignment