Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | BSR08_RS08925 | Genome accession | NZ_CP018184 |
| Coordinates | 1632108..1632443 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain KH2 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1627108..1637443
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSR08_RS08905 (BSR08_09040) | gcvT | 1627700..1628788 (-) | 1089 | WP_014480247.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| BSR08_RS08910 (BSR08_09045) | hepAA | 1629230..1630903 (+) | 1674 | WP_014480248.1 | SNF2-related protein | - |
| BSR08_RS08915 (BSR08_09050) | yqhG | 1630924..1631718 (+) | 795 | WP_014480249.1 | YqhG family protein | - |
| BSR08_RS08920 (BSR08_09055) | sinI | 1631901..1632074 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| BSR08_RS08925 (BSR08_09060) | sinR | 1632108..1632443 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| BSR08_RS08930 (BSR08_09065) | tasA | 1632536..1633321 (-) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
| BSR08_RS08935 (BSR08_09070) | sipW | 1633385..1633957 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| BSR08_RS08940 (BSR08_09075) | tapA | 1633941..1634702 (-) | 762 | WP_014480251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BSR08_RS08945 (BSR08_09080) | yqzG | 1634974..1635300 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| BSR08_RS08950 (BSR08_09085) | spoIITA | 1635342..1635521 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| BSR08_RS08955 (BSR08_09090) | comGG | 1635592..1635966 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| BSR08_RS08960 (BSR08_09095) | comGF | 1635967..1636350 (-) | 384 | WP_014480254.1 | ComG operon protein ComGF | Machinery gene |
| BSR08_RS08965 (BSR08_09100) | comGE | 1636376..1636723 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| BSR08_RS08970 (BSR08_09105) | comGD | 1636707..1637138 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| BSR08_RS08975 (BSR08_09110) | comGC | 1637128..1637424 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=206698 BSR08_RS08925 WP_003226345.1 1632108..1632443(+) (sinR) [Bacillus subtilis strain KH2]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=206698 BSR08_RS08925 WP_003226345.1 1632108..1632443(+) (sinR) [Bacillus subtilis strain KH2]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |