Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG   Type   Machinery gene
Locus tag   Aba9102_RS12795 Genome accession   NZ_CP023029
Coordinates   2615647..2617692 (-) Length   681 a.a.
NCBI ID   WP_129533597.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 9102     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2610647..2622692
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Aba9102_RS12760 (Aba9102_12730) - 2611131..2611811 (+) 681 WP_000842362.1 outer membrane lipid asymmetry maintenance protein MlaD -
  Aba9102_RS12765 (Aba9102_12735) - 2611838..2612479 (+) 642 WP_001093907.1 phospholipid-binding protein MlaC -
  Aba9102_RS12770 (Aba9102_12740) - 2612491..2612778 (+) 288 WP_000250997.1 lipid asymmetry maintenance protein MlaB -
  Aba9102_RS12775 (Aba9102_12745) - 2612848..2613861 (-) 1014 WP_000888321.1 CorA family divalent cation transporter -
  Aba9102_RS12780 (Aba9102_12750) - 2614019..2614600 (+) 582 WP_001084312.1 TIGR00730 family Rossman fold protein -
  Aba9102_RS12785 (Aba9102_12755) - 2614615..2615016 (+) 402 WP_000849702.1 NUDIX hydrolase -
  Aba9102_RS12790 (Aba9102_12760) comF 2615019..2615654 (-) 636 WP_000472273.1 ComF family protein Machinery gene
  Aba9102_RS12795 (Aba9102_12765) recG 2615647..2617692 (-) 2046 WP_129533597.1 ATP-dependent DNA helicase RecG Machinery gene
  Aba9102_RS12800 (Aba9102_12770) - 2617713..2618528 (+) 816 WP_000547775.1 NAD-dependent epimerase/dehydratase family protein -
  Aba9102_RS12805 (Aba9102_12775) adeT2 2618608..2619594 (+) 987 WP_000712907.1 putative multidrug efflux protein AdeT2 -
  Aba9102_RS12810 (Aba9102_12780) plsB 2619638..2622211 (-) 2574 WP_000045400.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -

Sequence


Protein


Download         Length: 681 a.a.        Molecular weight: 76411.97 Da        Isoelectric Point: 7.7228

>NTDB_id=205002 Aba9102_RS12795 WP_129533597.1 2615647..2617692(-) (recG) [Acinetobacter baumannii strain 9102]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQAKVREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILNDLKQHQPMLRLVQGDVGAGKTLVAAVAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARAHAEQQIKEGHAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLQRIASNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQAVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=205002 Aba9102_RS12795 WP_129533597.1 2615647..2617692(-) (recG) [Acinetobacter baumannii strain 9102]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTGCTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTGGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACCGACAAAATAAAACCTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGCGTAGGTGCACGAGGGCTTGAGCTTTATCATCCAGAAATTCAACTTATTAATGAACATACAC
CACTACCAAAAACACAGCTCACTGCAATTTATCCAAGTACCGATGGCCTAACACAGGCTAAAGTACGCGAATATGTTAAA
CAAGCGTTGAAGCATCATAGTGATGCTTTACCCGAGTTACTCCCTAAACAATATACAAATGGGTATGCACTCAAAGAAGC
TTTACATTACATTCATGAGCCGCCAGTTGATGCCAATATGATCCAATTGGCTCAAGGCTCTCATCCTGCGCAGCAACGTC
TTATTTTTGAAGAGCTGGTCGCACATCAAATTAGTCTTCTCACTCGACGTGCTTATATTCGTCAAATTGCTTCACCTGCT
TTTCCGAGTAGTAAAGTGCTTGCAAAAAAGCTGCTAGAAGCTTTACCTTTTCAAATGACCAACGCACAAAAACGTGTATC
AAAAGAAATTTTAAACGACTTAAAACAACATCAACCTATGCTGCGTTTGGTACAAGGTGATGTAGGGGCTGGAAAAACTT
TAGTTGCAGCGGTTGCAGCATGTCACGCATTAGAAGCAGATTGGCAAGTTGCGTTAATGGCACCCACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAACGCTGGTTTGAACCTTTAGGTATTACGGTAGCTTGGTTGTCGGGTAAACAAAAAGG
GAAAGCGCGGGCACACGCTGAGCAACAAATTAAAGAAGGCCATGCTGAACTAATTGTGGGTACTCATGCCTTATTTCAAG
ATAACGTTGAATTTGCAAAACTAGGACTCGTGATTATTGATGAACAGCACCGATTCGGGGTCGATCAACGATTAGCCTTA
CGCAATAAAGGCGCCGAACAGCTCACCCCACATCAACTGGTCATGACTGCAACGCCAATTCCTAGAACACTGGCAATGAG
TGCTTATGGCGATTTAGATACATCAATTATTGATGAATTACCCCCAGGCCGAACTCCAATTCAGACCGTCACGATTCCGC
TAGATCGTCGTGAAGAAGTACTGCAACGAATTGCTTCAAACTGCCGAGAAGGCAAACAGGCCTACTGGGTATGTACTCTG
GTTGAACAGTCCGAAACTTTAGATGCTCAAGCCGCCGAAGCCACCTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGCAAAATGAAAGCCGATGAAAAACAGGCTGTCATGCAAGCATTTAAAAACAATGAACTACAGC
TGCTAATTGCCACAACTGTTATTGAGGTTGGGGTAGATGTACCTAACGCTTCGATTATGGTCATTGAGAATGCTGAACGA
TTAGGGCTTTCACAGCTACACCAATTACGAGGGCGTGTAGGACGAGGTGCAAAAGCCAGTTTTTGTGTTCTTCTCTATAA
ACCACCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAATGATGGCTTTGTTATTGCTGAAAAAG
ATCTTGAGCTAAGAGGCCCGGGTGAGTTATTAGGAACAAAACAAACAGGTGATATGGGTTTCCGTGTCGCACGTTTAGAG
CGAGATGATCATTTATTGAGTCAAGCACACTACGTTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGATGCCTT
ATTGAAGCGCTGGCTTCCCGAAGCTCCTCGATATGCATATGTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

49.776

98.238

0.489

  recG/mmsA Streptococcus pneumoniae R6

41.353

97.651

0.404

  recG/mmsA Streptococcus pneumoniae R36A

41.353

97.651

0.404

  recG Bacillus subtilis subsp. subtilis str. 168

38.574

100

0.389


Multiple sequence alignment