Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BMU11_RS00780 Genome accession   NZ_CP017938
Coordinates   187411..187794 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain YMC2010/8/T346     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 182411..192794
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BMU11_RS00765 (BMU11_00700) pilJ 184308..186386 (-) 2079 WP_017482145.1 methyl-accepting chemotaxis protein -
  BMU11_RS00770 (BMU11_00705) pilI 186429..186965 (-) 537 WP_002116439.1 chemotaxis protein CheW -
  BMU11_RS00775 (BMU11_00710) pilH 187026..187388 (-) 363 WP_002116220.1 response regulator -
  BMU11_RS00780 (BMU11_00715) pilG 187411..187794 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  BMU11_RS00785 (BMU11_00720) - 188079..188717 (+) 639 WP_213033966.1 hypothetical protein -
  BMU11_RS00790 (BMU11_00725) nolF 188787..189896 (+) 1110 WP_078221320.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=204248 BMU11_RS00780 WP_000389061.1 187411..187794(-) (pilG) [Acinetobacter pittii strain YMC2010/8/T346]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=204248 BMU11_RS00780 WP_000389061.1 187411..187794(-) (pilG) [Acinetobacter pittii strain YMC2010/8/T346]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGCGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment