Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | K08M3_RS14705 | Genome accession | NZ_CP017913 |
| Coordinates | 3103512..3104105 (-) | Length | 197 a.a. |
| NCBI ID | WP_017633532.1 | Uniprot ID | A0A2I3CBG0 |
| Organism | Vibrio alginolyticus strain K08M3 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3098512..3109105
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K08M3_RS14685 (K08M3_28730) | aroB | 3099397..3100497 (-) | 1101 | WP_005381318.1 | 3-dehydroquinate synthase | - |
| K08M3_RS14690 (K08M3_28740) | aroK | 3100530..3101048 (-) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| K08M3_RS14695 (K08M3_28750) | pilQ | 3101236..3102981 (-) | 1746 | WP_005382765.1 | type IV pilus secretin PilQ | Machinery gene |
| K08M3_RS14700 (K08M3_28760) | pilP | 3103007..3103522 (-) | 516 | WP_086047068.1 | pilus assembly protein PilP | Machinery gene |
| K08M3_RS14705 (K08M3_28770) | pilO | 3103512..3104105 (-) | 594 | WP_017633532.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| K08M3_RS14710 (K08M3_28780) | pilN | 3104098..3104673 (-) | 576 | WP_017821732.1 | PilN domain-containing protein | Machinery gene |
| K08M3_RS14715 (K08M3_28790) | pilM | 3104657..3105673 (-) | 1017 | WP_017821733.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| K08M3_RS14720 (K08M3_28800) | - | 3105818..3108379 (+) | 2562 | WP_025768081.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 22987.48 Da Isoelectric Point: 5.0885
>NTDB_id=204021 K08M3_RS14705 WP_017633532.1 3103512..3104105(-) (pilO) [Vibrio alginolyticus strain K08M3]
MVDWQDLEIDEMAEWPLLPQIVVIALLIMAIQGLGYWFYLKPKDEQLNHLIQQEQTLKVALKIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGEKQSEHFLYRLPLNIELTGDFHDIGHFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVRANTYQFKPEETKNDK
MVDWQDLEIDEMAEWPLLPQIVVIALLIMAIQGLGYWFYLKPKDEQLNHLIQQEQTLKVALKIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGEKQSEHFLYRLPLNIELTGDFHDIGHFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVRANTYQFKPEETKNDK
Nucleotide
Download Length: 594 bp
>NTDB_id=204021 K08M3_RS14705 WP_017633532.1 3103512..3104105(-) (pilO) [Vibrio alginolyticus strain K08M3]
GTGGTTGATTGGCAGGATCTCGAAATAGATGAAATGGCCGAGTGGCCATTGTTGCCCCAGATTGTAGTAATCGCACTTCT
GATCATGGCGATTCAAGGCTTAGGTTATTGGTTTTACCTTAAACCGAAAGACGAACAGTTGAATCACTTGATTCAGCAGG
AGCAGACACTCAAGGTGGCATTGAAGATCAAAGCGAACAAAGTGGCAGCGTTGCCTCAGCTTCAATCTCAATTGGATGAA
CTTACCACTCGTTACGAGTTATTACTGCAACAACTGCCTGCGCAAAAAGAGCTGGCTACAATGCTCGCTTCAGTGAATGA
GCTTGGCATCGACAATAAGCTGACTTTCACCCGAATCGACTGGGGCGAAAAACAATCAGAGCACTTCCTTTATCGTCTCC
CTTTAAACATAGAGTTAACGGGCGACTTTCATGACATCGGCCATTTTTCTCAGGCAATAGCGACGCTACCTCGAATCATC
ACGTTTAAAGATGTGACTTGGCAACGTGTCAGCCAAGAGAGCGAAACCCTGCACTTTCGGGTGCGTGCTAATACCTATCA
GTTTAAGCCGGAGGAGACGAAAAATGACAAGTAA
GTGGTTGATTGGCAGGATCTCGAAATAGATGAAATGGCCGAGTGGCCATTGTTGCCCCAGATTGTAGTAATCGCACTTCT
GATCATGGCGATTCAAGGCTTAGGTTATTGGTTTTACCTTAAACCGAAAGACGAACAGTTGAATCACTTGATTCAGCAGG
AGCAGACACTCAAGGTGGCATTGAAGATCAAAGCGAACAAAGTGGCAGCGTTGCCTCAGCTTCAATCTCAATTGGATGAA
CTTACCACTCGTTACGAGTTATTACTGCAACAACTGCCTGCGCAAAAAGAGCTGGCTACAATGCTCGCTTCAGTGAATGA
GCTTGGCATCGACAATAAGCTGACTTTCACCCGAATCGACTGGGGCGAAAAACAATCAGAGCACTTCCTTTATCGTCTCC
CTTTAAACATAGAGTTAACGGGCGACTTTCATGACATCGGCCATTTTTCTCAGGCAATAGCGACGCTACCTCGAATCATC
ACGTTTAAAGATGTGACTTGGCAACGTGTCAGCCAAGAGAGCGAAACCCTGCACTTTCGGGTGCGTGCTAATACCTATCA
GTTTAAGCCGGAGGAGACGAAAAATGACAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
87.368 |
96.447 |
0.843 |
| pilO | Vibrio cholerae strain A1552 |
70.681 |
96.954 |
0.685 |