Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | K10K4_RS14440 | Genome accession | NZ_CP017911 |
| Coordinates | 3040945..3041589 (+) | Length | 214 a.a. |
| NCBI ID | WP_005381237.1 | Uniprot ID | A0A2I3CB98 |
| Organism | Vibrio alginolyticus strain K10K4 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3035945..3046589
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K10K4_RS14425 (K10K4_28100) | - | 3036419..3037864 (-) | 1446 | WP_054579427.1 | hypothetical protein | - |
| K10K4_RS14430 (K10K4_28110) | csrD | 3037876..3039885 (-) | 2010 | WP_054728884.1 | RNase E specificity factor CsrD | - |
| K10K4_RS14435 (K10K4_28120) | ssb | 3040128..3040667 (-) | 540 | WP_005387798.1 | single-stranded DNA-binding protein | Machinery gene |
| K10K4_RS14440 (K10K4_28130) | qstR | 3040945..3041589 (+) | 645 | WP_005381237.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| K10K4_RS14445 (K10K4_28140) | galU | 3041749..3042623 (+) | 875 | Protein_2705 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| K10K4_RS14450 (K10K4_28150) | uvrA | 3042773..3045598 (+) | 2826 | Protein_2706 | excinuclease ABC subunit UvrA | - |
| K10K4_RS14455 (K10K4_28190) | - | 3045666..3046263 (+) | 598 | Protein_2707 | pilin glycosylation ligase domain-containing protein | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24397.32 Da Isoelectric Point: 9.8721
>NTDB_id=203966 K10K4_RS14440 WP_005381237.1 3040945..3041589(+) (qstR) [Vibrio alginolyticus strain K10K4]
MRKSAYARKLFLISMEDNAQKKVAALEKYVDMSIPVISTAALMEAKPQHRNKILLIDFSEHKSLVQSIKNLPLVWKNFET
VVFNVPKRLTTDELLSFGQLKGVFYSEDTLEQIGEGLKGIVNGQNWLPRNVTSQLLHYYRNVINTHTAPATVDLTIRELQ
VLRCLQAGASNSQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
MRKSAYARKLFLISMEDNAQKKVAALEKYVDMSIPVISTAALMEAKPQHRNKILLIDFSEHKSLVQSIKNLPLVWKNFET
VVFNVPKRLTTDELLSFGQLKGVFYSEDTLEQIGEGLKGIVNGQNWLPRNVTSQLLHYYRNVINTHTAPATVDLTIRELQ
VLRCLQAGASNSQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
Nucleotide
Download Length: 645 bp
>NTDB_id=203966 K10K4_RS14440 WP_005381237.1 3040945..3041589(+) (qstR) [Vibrio alginolyticus strain K10K4]
GTGAGAAAGTCGGCTTACGCAAGAAAGCTATTTCTGATCAGTATGGAAGATAATGCGCAAAAAAAAGTGGCGGCACTCGA
AAAGTACGTTGATATGAGCATCCCGGTGATTTCAACCGCAGCACTCATGGAAGCCAAGCCACAACACCGTAATAAAATTC
TACTGATAGACTTCAGTGAACATAAATCACTTGTTCAATCGATCAAAAACTTGCCTCTTGTATGGAAAAACTTTGAAACC
GTTGTCTTCAACGTGCCTAAAAGACTAACCACGGATGAACTTCTTTCATTTGGTCAATTAAAAGGTGTGTTTTATTCTGA
AGATACGCTAGAGCAAATTGGAGAAGGGTTAAAAGGCATTGTTAACGGTCAAAACTGGCTGCCGCGTAATGTAACCAGTC
AACTTTTACACTATTACCGCAATGTCATTAATACTCATACAGCACCAGCTACGGTAGACCTAACCATTCGTGAGCTACAA
GTACTGCGTTGCCTACAAGCTGGCGCCTCGAACAGTCAGATGGCCGAGGAGTTATTCGTCAGTGAATTCACCATCAAATC
GCACTTATATCAGATATTCAAAAAGCTATCCGTAAAGAACCGAGTACAGGCAATCGCCTGGGCAGACCAAAACTTAATGT
CATGA
GTGAGAAAGTCGGCTTACGCAAGAAAGCTATTTCTGATCAGTATGGAAGATAATGCGCAAAAAAAAGTGGCGGCACTCGA
AAAGTACGTTGATATGAGCATCCCGGTGATTTCAACCGCAGCACTCATGGAAGCCAAGCCACAACACCGTAATAAAATTC
TACTGATAGACTTCAGTGAACATAAATCACTTGTTCAATCGATCAAAAACTTGCCTCTTGTATGGAAAAACTTTGAAACC
GTTGTCTTCAACGTGCCTAAAAGACTAACCACGGATGAACTTCTTTCATTTGGTCAATTAAAAGGTGTGTTTTATTCTGA
AGATACGCTAGAGCAAATTGGAGAAGGGTTAAAAGGCATTGTTAACGGTCAAAACTGGCTGCCGCGTAATGTAACCAGTC
AACTTTTACACTATTACCGCAATGTCATTAATACTCATACAGCACCAGCTACGGTAGACCTAACCATTCGTGAGCTACAA
GTACTGCGTTGCCTACAAGCTGGCGCCTCGAACAGTCAGATGGCCGAGGAGTTATTCGTCAGTGAATTCACCATCAAATC
GCACTTATATCAGATATTCAAAAAGCTATCCGTAAAGAACCGAGTACAGGCAATCGCCTGGGCAGACCAAAACTTAATGT
CATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
94.86 |
100 |
0.949 |
| qstR | Vibrio campbellii strain DS40M4 |
89.252 |
100 |
0.893 |
| qstR | Vibrio cholerae strain A1552 |
51.869 |
100 |
0.519 |