Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | K04M3_RS14750 | Genome accession | NZ_CP017896 |
| Coordinates | 3111548..3112141 (-) | Length | 197 a.a. |
| NCBI ID | WP_017633532.1 | Uniprot ID | A0A2I3CBG0 |
| Organism | Vibrio alginolyticus isolate K04M3 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3106548..3117141
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K04M3_RS14730 (K04M3_28830) | aroB | 3107433..3108533 (-) | 1101 | WP_005381318.1 | 3-dehydroquinate synthase | - |
| K04M3_RS14735 (K04M3_28840) | aroK | 3108566..3109084 (-) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| K04M3_RS14740 (K04M3_28850) | pilQ | 3109272..3111017 (-) | 1746 | WP_005382765.1 | type IV pilus secretin PilQ | Machinery gene |
| K04M3_RS14745 (K04M3_28860) | pilP | 3111043..3111558 (-) | 516 | WP_086047068.1 | pilus assembly protein PilP | Machinery gene |
| K04M3_RS14750 (K04M3_28870) | pilO | 3111548..3112141 (-) | 594 | WP_017633532.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| K04M3_RS14755 (K04M3_28880) | pilN | 3112134..3112709 (-) | 576 | WP_017821732.1 | PilN domain-containing protein | Machinery gene |
| K04M3_RS14760 (K04M3_28890) | pilM | 3112693..3113709 (-) | 1017 | WP_017821733.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| K04M3_RS14765 (K04M3_28900) | - | 3113854..3116415 (+) | 2562 | WP_025768081.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 22987.48 Da Isoelectric Point: 5.0885
>NTDB_id=203773 K04M3_RS14750 WP_017633532.1 3111548..3112141(-) (pilO) [Vibrio alginolyticus isolate K04M3]
MVDWQDLEIDEMAEWPLLPQIVVIALLIMAIQGLGYWFYLKPKDEQLNHLIQQEQTLKVALKIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGEKQSEHFLYRLPLNIELTGDFHDIGHFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVRANTYQFKPEETKNDK
MVDWQDLEIDEMAEWPLLPQIVVIALLIMAIQGLGYWFYLKPKDEQLNHLIQQEQTLKVALKIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGEKQSEHFLYRLPLNIELTGDFHDIGHFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVRANTYQFKPEETKNDK
Nucleotide
Download Length: 594 bp
>NTDB_id=203773 K04M3_RS14750 WP_017633532.1 3111548..3112141(-) (pilO) [Vibrio alginolyticus isolate K04M3]
GTGGTTGATTGGCAGGATCTCGAAATAGATGAAATGGCCGAGTGGCCATTGTTGCCCCAGATTGTAGTAATCGCACTTCT
GATCATGGCGATTCAAGGCTTAGGTTATTGGTTTTACCTTAAACCGAAAGACGAACAGTTGAATCACTTGATTCAGCAGG
AGCAGACACTCAAGGTGGCATTGAAGATCAAAGCGAACAAAGTGGCAGCGTTGCCTCAGCTTCAATCTCAATTGGATGAA
CTTACCACTCGTTACGAGTTATTACTGCAACAACTGCCTGCGCAAAAAGAGCTGGCTACAATGCTCGCTTCAGTGAATGA
GCTTGGCATCGACAATAAGCTGACTTTCACCCGAATCGACTGGGGCGAAAAACAATCAGAGCACTTCCTTTATCGTCTCC
CTTTAAACATAGAGTTAACGGGCGACTTTCATGACATCGGCCATTTTTCTCAGGCAATAGCGACGCTACCTCGAATCATC
ACGTTTAAAGATGTGACTTGGCAACGTGTCAGCCAAGAGAGCGAAACCCTGCACTTTCGGGTGCGTGCTAATACCTATCA
GTTTAAGCCGGAGGAGACGAAAAATGACAAGTAA
GTGGTTGATTGGCAGGATCTCGAAATAGATGAAATGGCCGAGTGGCCATTGTTGCCCCAGATTGTAGTAATCGCACTTCT
GATCATGGCGATTCAAGGCTTAGGTTATTGGTTTTACCTTAAACCGAAAGACGAACAGTTGAATCACTTGATTCAGCAGG
AGCAGACACTCAAGGTGGCATTGAAGATCAAAGCGAACAAAGTGGCAGCGTTGCCTCAGCTTCAATCTCAATTGGATGAA
CTTACCACTCGTTACGAGTTATTACTGCAACAACTGCCTGCGCAAAAAGAGCTGGCTACAATGCTCGCTTCAGTGAATGA
GCTTGGCATCGACAATAAGCTGACTTTCACCCGAATCGACTGGGGCGAAAAACAATCAGAGCACTTCCTTTATCGTCTCC
CTTTAAACATAGAGTTAACGGGCGACTTTCATGACATCGGCCATTTTTCTCAGGCAATAGCGACGCTACCTCGAATCATC
ACGTTTAAAGATGTGACTTGGCAACGTGTCAGCCAAGAGAGCGAAACCCTGCACTTTCGGGTGCGTGCTAATACCTATCA
GTTTAAGCCGGAGGAGACGAAAAATGACAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
87.368 |
96.447 |
0.843 |
| pilO | Vibrio cholerae strain A1552 |
70.681 |
96.954 |
0.685 |