Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | K04M3_RS14755 | Genome accession | NZ_CP017896 |
| Coordinates | 3112134..3112709 (-) | Length | 191 a.a. |
| NCBI ID | WP_017821732.1 | Uniprot ID | A0A2I3CBW9 |
| Organism | Vibrio alginolyticus isolate K04M3 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3107134..3117709
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K04M3_RS14730 (K04M3_28830) | aroB | 3107433..3108533 (-) | 1101 | WP_005381318.1 | 3-dehydroquinate synthase | - |
| K04M3_RS14735 (K04M3_28840) | aroK | 3108566..3109084 (-) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| K04M3_RS14740 (K04M3_28850) | pilQ | 3109272..3111017 (-) | 1746 | WP_005382765.1 | type IV pilus secretin PilQ | Machinery gene |
| K04M3_RS14745 (K04M3_28860) | pilP | 3111043..3111558 (-) | 516 | WP_086047068.1 | pilus assembly protein PilP | Machinery gene |
| K04M3_RS14750 (K04M3_28870) | pilO | 3111548..3112141 (-) | 594 | WP_017633532.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| K04M3_RS14755 (K04M3_28880) | pilN | 3112134..3112709 (-) | 576 | WP_017821732.1 | PilN domain-containing protein | Machinery gene |
| K04M3_RS14760 (K04M3_28890) | pilM | 3112693..3113709 (-) | 1017 | WP_017821733.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| K04M3_RS14765 (K04M3_28900) | - | 3113854..3116415 (+) | 2562 | WP_025768081.1 | penicillin-binding protein 1A | - |
| K04M3_RS14770 (K04M3_28910) | oxyR | 3116469..3117380 (-) | 912 | WP_005381326.1 | DNA-binding transcriptional regulator OxyR | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 22349.86 Da Isoelectric Point: 7.4658
>NTDB_id=203774 K04M3_RS14755 WP_017821732.1 3112134..3112709(-) (pilN) [Vibrio alginolyticus isolate K04M3]
MLYRINLLPWRESQREEHRRRFISLVALGMLVAVGIQWGIGKFFEYQQDQQQERLDYLTHYIAELDQRIEAMKIAEQEHS
KILERLKVVEGLQNGRNKTTEFMNLMPAVIPEGVYVDKIKMNDLEIEISGISDSTPKLATMLDNMERSAKLNDVEMHSIV
HGKARFGKEFQTFKVSFMFKVTEKKLEAQRG
MLYRINLLPWRESQREEHRRRFISLVALGMLVAVGIQWGIGKFFEYQQDQQQERLDYLTHYIAELDQRIEAMKIAEQEHS
KILERLKVVEGLQNGRNKTTEFMNLMPAVIPEGVYVDKIKMNDLEIEISGISDSTPKLATMLDNMERSAKLNDVEMHSIV
HGKARFGKEFQTFKVSFMFKVTEKKLEAQRG
Nucleotide
Download Length: 576 bp
>NTDB_id=203774 K04M3_RS14755 WP_017821732.1 3112134..3112709(-) (pilN) [Vibrio alginolyticus isolate K04M3]
GTGCTTTATCGCATTAATTTACTTCCTTGGCGAGAGAGTCAAAGAGAAGAGCACCGACGTCGTTTCATCAGTTTGGTCGC
ATTAGGCATGTTGGTCGCTGTTGGCATCCAGTGGGGTATTGGAAAGTTTTTTGAGTACCAACAAGATCAACAACAGGAGC
GGCTCGATTACCTCACTCACTACATTGCCGAACTCGACCAGCGTATTGAAGCAATGAAAATTGCAGAGCAAGAGCACAGC
AAAATCCTCGAACGTCTAAAGGTCGTTGAAGGTTTACAAAACGGACGAAACAAAACGACCGAGTTCATGAACTTAATGCC
TGCCGTTATCCCTGAAGGTGTATATGTCGACAAGATCAAAATGAATGATCTGGAAATTGAGATCTCTGGGATCTCTGATA
GCACTCCAAAACTTGCCACGATGCTGGACAACATGGAGCGCTCGGCCAAGTTGAACGACGTAGAAATGCATTCCATCGTT
CACGGCAAAGCCCGTTTTGGGAAAGAGTTTCAAACATTCAAAGTGTCTTTCATGTTCAAAGTAACGGAGAAGAAATTGGA
GGCTCAACGTGGTTGA
GTGCTTTATCGCATTAATTTACTTCCTTGGCGAGAGAGTCAAAGAGAAGAGCACCGACGTCGTTTCATCAGTTTGGTCGC
ATTAGGCATGTTGGTCGCTGTTGGCATCCAGTGGGGTATTGGAAAGTTTTTTGAGTACCAACAAGATCAACAACAGGAGC
GGCTCGATTACCTCACTCACTACATTGCCGAACTCGACCAGCGTATTGAAGCAATGAAAATTGCAGAGCAAGAGCACAGC
AAAATCCTCGAACGTCTAAAGGTCGTTGAAGGTTTACAAAACGGACGAAACAAAACGACCGAGTTCATGAACTTAATGCC
TGCCGTTATCCCTGAAGGTGTATATGTCGACAAGATCAAAATGAATGATCTGGAAATTGAGATCTCTGGGATCTCTGATA
GCACTCCAAAACTTGCCACGATGCTGGACAACATGGAGCGCTCGGCCAAGTTGAACGACGTAGAAATGCATTCCATCGTT
CACGGCAAAGCCCGTTTTGGGAAAGAGTTTCAAACATTCAAAGTGTCTTTCATGTTCAAAGTAACGGAGAAGAAATTGGA
GGCTCAACGTGGTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Vibrio campbellii strain DS40M4 |
82.199 |
100 |
0.822 |
| pilN | Vibrio cholerae strain A1552 |
63.277 |
92.67 |
0.586 |