Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   SMA_0230 Genome accession   HE613569
Coordinates   230099..231361 (+) Length   420 a.a.
NCBI ID   CCF01521.1    Uniprot ID   -
Organism   Streptococcus macedonicus ACA-DC 198     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 225099..236361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMA_0225 galE 225893..226891 (+) 999 CCF01516.1 UDP-glucose 4-epimerase -
  SMA_0226 rimI 226951..227820 (+) 870 CCF01517.1 Hypothetical protein -
  SMA_0227 yajC 227916..228287 (+) 372 CCF01518.1 Preprotein translocase subunit YajC -
  SMA_0228 uppS 228441..229190 (+) 750 CCF01519.1 Undecaprenyl pyrophosphate synthetase -
  SMA_0229 cdsA 229203..229997 (+) 795 CCF01520.1 Phosphatidate cytidylyltransferase -
  SMA_0230 eeP 230099..231361 (+) 1263 CCF01521.1 Membrane-associated zinc metalloprotease Regulator
  SMA_0231 proS 231523..233379 (+) 1857 CCF01522.1 Prolyl-tRNA synthetase Bacterial type -

Sequence

Protein


Download         Length: 420 a.a.        Molecular weight: 45873.06 Da        Isoelectric Point: 4.5901

>NTDB_id=20331 SMA_0230 CCF01521.1 230099..231361(+) (eeP) [Streptococcus macedonicus ACA-DC 198]
MLGILTFIIVFGILVIVHEFGHLYFAKKSGILVREFSIGMGPKIFSHIDKEGTAYTIRILPLGGYVRMAGWGDDTTEIKT
GTPASLTLNQDGLVTRINLSQKQLDNTALPMNVTAYDLEDKLEITGLVLDEMKTYSVDHDATIVEEDGTEIRIAPLDVQY
QNATVWRRLITNFAGPLNNFILGTIVFILLVFMQGGVPDNSTNVIQVTDGGAMQAAGVESGDRVLSIENYDISNWSDLTE
AVTKATENISSGDTISVTVETSSGKTETLDIKPRENNGSYYIGVTRVLKTGFWDKVTGGFQMAWQSATAILTALKGLISN
FSLDKLGGPVAMYQVSSQAASNGLTSVLYLLALLSMDLGIVNLIPIPALDGGKILMNLIEIVRRKPLKQETETYITLVGV
VIMLILMIAVTWNDIMRVFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=20331 SMA_0230 CCF01521.1 230099..231361(+) (eeP) [Streptococcus macedonicus ACA-DC 198]
ATGCTCGGAATTTTAACCTTTATTATTGTTTTTGGAATTTTAGTTATTGTCCATGAATTTGGGCACCTTTACTTTGCTAA
AAAGTCTGGTATCTTAGTACGAGAATTTTCTATCGGAATGGGCCCGAAAATCTTTTCGCATATTGATAAAGAGGGTACCG
CTTATACAATTCGTATCCTACCTCTGGGTGGCTATGTACGCATGGCTGGTTGGGGTGATGATACAACGGAAATAAAGACT
GGAACACCTGCCAGTTTGACACTAAATCAAGACGGTTTGGTGACACGTATTAATTTATCACAAAAGCAGTTGGACAACAC
CGCTCTTCCGATGAATGTCACGGCTTATGATTTAGAGGATAAGTTGGAAATCACAGGTCTAGTGCTCGATGAAATGAAAA
CCTATTCTGTTGACCATGATGCGACTATTGTCGAGGAAGATGGTACAGAAATCCGTATTGCACCGCTAGATGTGCAATAT
CAAAATGCAACAGTTTGGAGACGTTTAATCACAAACTTTGCTGGTCCGTTGAATAACTTTATTTTGGGAACAATTGTCTT
TATCCTTCTTGTTTTCATGCAAGGTGGTGTACCAGATAATTCAACGAATGTTATTCAAGTAACTGACGGCGGTGCCATGC
AGGCAGCTGGTGTTGAAAGTGGTGACCGTGTCCTATCCATCGAAAATTACGACATCTCTAATTGGTCTGATTTGACGGAG
GCTGTCACGAAAGCAACTGAAAATATTTCAAGTGGTGATACGATTTCCGTAACCGTTGAAACCAGCTCAGGAAAGACTGA
AACGCTTGATATCAAACCGCGAGAAAATAATGGTAGCTACTATATCGGTGTTACTCGAGTATTGAAAACAGGTTTCTGGG
ACAAGGTCACTGGTGGCTTCCAAATGGCTTGGCAAAGCGCAACCGCTATTCTGACAGCTTTGAAAGGCTTGATTTCAAAC
TTTAGTTTGGATAAATTAGGTGGTCCTGTTGCCATGTACCAAGTTTCAAGTCAAGCTGCTTCAAATGGATTGACTTCAGT
TCTTTACTTATTGGCGCTATTATCAATGGACTTAGGAATTGTGAATTTGATTCCGATTCCAGCCTTGGACGGTGGAAAAA
TTTTGATGAACCTTATCGAAATTGTTCGTCGTAAACCGCTTAAACAAGAAACCGAAACTTATATCACCCTAGTTGGCGTT
GTTATCATGCTTATTTTGATGATTGCTGTCACTTGGAACGATATTATGCGAGTTTTCTTTTAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(201-272)

Peptidase family M50 (Peptidase_M50)

(6-406)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

68.333

100

0.683
  eeP Streptococcus thermophilus LMG 18311

68.095

100

0.681

Multiple sequence alignment