Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | DN94_03805 | Genome accession | CP007565 |
| Coordinates | 712944..714749 (+) | Length | 601 a.a. |
| NCBI ID | AHX74839.1 | Uniprot ID | - |
| Organism | Streptococcus agalactiae strain 138spar | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 707944..719749
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DN94_03780 | - | 708161..708862 (+) | 702 | AHX74834.1 | glucosamine-6-phosphate deaminase | - |
| DN94_03785 | - | 708934..709890 (-) | 957 | AHX74835.1 | hypothetical protein | - |
| DN94_03790 | - | 709986..710705 (+) | 720 | AHX74836.1 | 16S rRNA pseudouridylate synthase | - |
| DN94_03795 | - | 710778..711929 (+) | 1152 | AHX74837.1 | MFS transporter | - |
| DN94_03800 | coiA | 711981..712928 (+) | 948 | AHX74838.1 | competence protein CoiA | Machinery gene |
| DN94_03805 | pepF | 712944..714749 (+) | 1806 | AHX74839.1 | oligopeptidase PepB | Regulator |
| DN94_03810 | - | 714944..715570 (+) | 627 | AHX74840.1 | HAD family hydrolase | - |
| DN94_03815 | - | 715644..716351 (+) | 708 | AHX74841.1 | methyltransferase | - |
| DN94_03820 | - | 716412..717341 (+) | 930 | AHX74842.1 | foldase | - |
| DN94_03825 | - | 717583..718068 (+) | 486 | AHX74843.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 601 a.a. Molecular weight: 69636.76 Da Isoelectric Point: 4.6805
>NTDB_id=20303 DN94_03805 AHX74839.1 712944..714749(+) (pepF) [Streptococcus agalactiae strain 138spar]
MSDNRSHIEEKYQWDLTTVFAIDELWETEVVELTQAIDDAKGFSGHLLDSSQSLLEITEVELELSRRLEKVYVYASMKND
QDTTVAKYQEFQAKATALYAKFSEIFSFYEPELLQLSESDYQSFLLEMPDLQKYDHFFEKIFANKPHVLSQNEEELLAGA
SEIFGAAGETFEILDNADMVFPIVKNAKGEEVELTHGNFISLMESSDRTVRKEAYQAMYSTYEQFQHTYAKTLQTNVKSQ
NFKARVHHYQSARQSALSANFIPEEVYETLIKTVNHHLPLLHRYMKLRQKVLGLDDLKMYDVYTPLSQMDVSFTYDEALK
KSEKVLAIFGEAYSERVHRAFTERWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDTLDNLYTLVHETGHSLHSTFTREN
QPYVYGDYSIFLAEIASTTNENILTEILLKEVKDDKNRFAILNHYLDGFKGTIFRQTQFAEFEHAIHVADQEGQVLTSEY
LNNLYAELNEKYYGLTKEDNHFIQYEWARIPHFYYNYYVFQYATGFAAANYLAERIVNGNPEDKEAYLNYLKAGNSDYPL
NVIAKAGVDMTSADYLDAAFRVFEERLVELENLVAKGVHND
MSDNRSHIEEKYQWDLTTVFAIDELWETEVVELTQAIDDAKGFSGHLLDSSQSLLEITEVELELSRRLEKVYVYASMKND
QDTTVAKYQEFQAKATALYAKFSEIFSFYEPELLQLSESDYQSFLLEMPDLQKYDHFFEKIFANKPHVLSQNEEELLAGA
SEIFGAAGETFEILDNADMVFPIVKNAKGEEVELTHGNFISLMESSDRTVRKEAYQAMYSTYEQFQHTYAKTLQTNVKSQ
NFKARVHHYQSARQSALSANFIPEEVYETLIKTVNHHLPLLHRYMKLRQKVLGLDDLKMYDVYTPLSQMDVSFTYDEALK
KSEKVLAIFGEAYSERVHRAFTERWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDTLDNLYTLVHETGHSLHSTFTREN
QPYVYGDYSIFLAEIASTTNENILTEILLKEVKDDKNRFAILNHYLDGFKGTIFRQTQFAEFEHAIHVADQEGQVLTSEY
LNNLYAELNEKYYGLTKEDNHFIQYEWARIPHFYYNYYVFQYATGFAAANYLAERIVNGNPEDKEAYLNYLKAGNSDYPL
NVIAKAGVDMTSADYLDAAFRVFEERLVELENLVAKGVHND
Nucleotide
Download Length: 1806 bp
>NTDB_id=20303 DN94_03805 AHX74839.1 712944..714749(+) (pepF) [Streptococcus agalactiae strain 138spar]
ATGTCAGACAATCGCTCACATATTGAAGAAAAATACCAATGGGATTTAACTACTGTCTTTGCGATTGATGAGTTATGGGA
AACTGAAGTGGTAGAGCTTACTCAAGCCATCGATGACGCAAAGGGTTTTTCAGGTCATCTGTTGGACTCAAGCCAATCTT
TATTGGAGATTACGGAGGTTGAACTAGAGTTATCTCGCCGTTTAGAAAAAGTTTATGTCTATGCTTCAATGAAAAATGAC
CAAGACACCACTGTTGCGAAATATCAAGAATTTCAAGCGAAAGCGACAGCGCTCTATGCAAAATTTAGTGAAATATTTTC
GTTTTACGAGCCAGAACTATTGCAACTTTCAGAGTCTGATTACCAGTCATTCCTTTTAGAAATGCCTGACTTGCAAAAAT
ATGATCATTTCTTTGAGAAAATATTTGCTAATAAACCTCATGTCTTATCTCAAAACGAAGAAGAATTGTTAGCTGGTGCT
AGTGAGATTTTTGGAGCAGCTGGTGAGACATTTGAAATCCTTGATAATGCAGATATGGTCTTCCCAATTGTAAAAAATGC
AAAAGGTGAGGAAGTTGAGCTTACACATGGTAACTTCATTTCCCTTATGGAATCTAGCGATAGGACGGTTCGAAAAGAAG
CATATCAAGCTATGTATAGCACATATGAACAATTCCAGCATACTTACGCTAAAACATTACAAACAAATGTGAAATCTCAA
AATTTTAAGGCTCGTGTGCATCATTATCAATCAGCACGCCAATCAGCTCTATCTGCCAATTTTATTCCAGAAGAGGTCTA
CGAAACTCTAATTAAGACAGTTAATCATCATTTACCGCTCTTACATCGTTATATGAAGTTGCGTCAAAAAGTTCTTGGGC
TAGATGATTTGAAGATGTATGACGTGTATACACCCCTTTCTCAAATGGATGTGAGTTTTACTTATGATGAAGCTCTAAAA
AAATCAGAGAAGGTTCTGGCTATTTTTGGCGAAGCATATTCTGAACGTGTTCATCGTGCTTTTACTGAACGTTGGATTGA
TGTCCATGTTAACAAAGGAAAGAGGTCAGGCGCTTATTCAGGTGGATCTTATGACACTAATGCTTTCATGCTTCTTAACT
GGCAAGATACTTTAGACAATCTTTATACGCTGGTGCATGAAACTGGACATAGTCTACACTCGACGTTTACTCGTGAAAAT
CAACCCTATGTTTATGGTGATTATTCTATTTTCCTAGCTGAAATTGCATCAACAACAAATGAAAATATATTAACAGAAAT
CCTTTTGAAAGAAGTTAAAGATGATAAAAATCGCTTTGCAATTCTCAATCATTATTTGGACGGTTTCAAAGGAACAATTT
TTAGACAAACACAGTTCGCTGAATTCGAACATGCCATTCATGTAGCTGATCAGGAGGGGCAAGTACTAACTAGCGAATAC
TTAAACAACCTTTACGCTGAGCTTAATGAAAAATATTATGGTTTGACTAAAGAAGATAATCATTTTATTCAATATGAATG
GGCAAGAATTCCACACTTTTACTACAATTATTATGTTTTCCAATATGCAACCGGCTTCGCAGCAGCAAATTATTTAGCAG
AGCGTATTGTAAACGGTAATCCGGAGGATAAAGAGGCCTACCTAAATTACCTTAAAGCTGGTAATTCAGATTACCCTCTA
AACGTCATTGCTAAAGCCGGGGTTGATATGACTAGTGCAGACTATCTGGATGCAGCTTTTAGAGTATTTGAAGAGCGTTT
AGTGGAACTTGAAAATCTTGTAGCAAAAGGCGTCCATAATGATTAA
ATGTCAGACAATCGCTCACATATTGAAGAAAAATACCAATGGGATTTAACTACTGTCTTTGCGATTGATGAGTTATGGGA
AACTGAAGTGGTAGAGCTTACTCAAGCCATCGATGACGCAAAGGGTTTTTCAGGTCATCTGTTGGACTCAAGCCAATCTT
TATTGGAGATTACGGAGGTTGAACTAGAGTTATCTCGCCGTTTAGAAAAAGTTTATGTCTATGCTTCAATGAAAAATGAC
CAAGACACCACTGTTGCGAAATATCAAGAATTTCAAGCGAAAGCGACAGCGCTCTATGCAAAATTTAGTGAAATATTTTC
GTTTTACGAGCCAGAACTATTGCAACTTTCAGAGTCTGATTACCAGTCATTCCTTTTAGAAATGCCTGACTTGCAAAAAT
ATGATCATTTCTTTGAGAAAATATTTGCTAATAAACCTCATGTCTTATCTCAAAACGAAGAAGAATTGTTAGCTGGTGCT
AGTGAGATTTTTGGAGCAGCTGGTGAGACATTTGAAATCCTTGATAATGCAGATATGGTCTTCCCAATTGTAAAAAATGC
AAAAGGTGAGGAAGTTGAGCTTACACATGGTAACTTCATTTCCCTTATGGAATCTAGCGATAGGACGGTTCGAAAAGAAG
CATATCAAGCTATGTATAGCACATATGAACAATTCCAGCATACTTACGCTAAAACATTACAAACAAATGTGAAATCTCAA
AATTTTAAGGCTCGTGTGCATCATTATCAATCAGCACGCCAATCAGCTCTATCTGCCAATTTTATTCCAGAAGAGGTCTA
CGAAACTCTAATTAAGACAGTTAATCATCATTTACCGCTCTTACATCGTTATATGAAGTTGCGTCAAAAAGTTCTTGGGC
TAGATGATTTGAAGATGTATGACGTGTATACACCCCTTTCTCAAATGGATGTGAGTTTTACTTATGATGAAGCTCTAAAA
AAATCAGAGAAGGTTCTGGCTATTTTTGGCGAAGCATATTCTGAACGTGTTCATCGTGCTTTTACTGAACGTTGGATTGA
TGTCCATGTTAACAAAGGAAAGAGGTCAGGCGCTTATTCAGGTGGATCTTATGACACTAATGCTTTCATGCTTCTTAACT
GGCAAGATACTTTAGACAATCTTTATACGCTGGTGCATGAAACTGGACATAGTCTACACTCGACGTTTACTCGTGAAAAT
CAACCCTATGTTTATGGTGATTATTCTATTTTCCTAGCTGAAATTGCATCAACAACAAATGAAAATATATTAACAGAAAT
CCTTTTGAAAGAAGTTAAAGATGATAAAAATCGCTTTGCAATTCTCAATCATTATTTGGACGGTTTCAAAGGAACAATTT
TTAGACAAACACAGTTCGCTGAATTCGAACATGCCATTCATGTAGCTGATCAGGAGGGGCAAGTACTAACTAGCGAATAC
TTAAACAACCTTTACGCTGAGCTTAATGAAAAATATTATGGTTTGACTAAAGAAGATAATCATTTTATTCAATATGAATG
GGCAAGAATTCCACACTTTTACTACAATTATTATGTTTTCCAATATGCAACCGGCTTCGCAGCAGCAAATTATTTAGCAG
AGCGTATTGTAAACGGTAATCCGGAGGATAAAGAGGCCTACCTAAATTACCTTAAAGCTGGTAATTCAGATTACCCTCTA
AACGTCATTGCTAAAGCCGGGGTTGATATGACTAGTGCAGACTATCTGGATGCAGCTTTTAGAGTATTTGAAGAGCGTTT
AGTGGAACTTGAAAATCTTGTAGCAAAAGGCGTCCATAATGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
70.952 |
99.667 |
0.707 |