Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   Spy49_1344c Genome accession   CP000829
Coordinates   1348759..1349793 (-) Length   344 a.a.
NCBI ID   ACI61622.1    Uniprot ID   -
Organism   Streptococcus pyogenes NZ131     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1343759..1354793
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Spy49_1338c - 1344535..1344837 (-) 303 ACI61616.1 ribosomal protein L7Ae family protein -
  Spy49_1339c - 1344830..1345126 (-) 297 ACI61617.1 Predicted nucleic-acid-binding protein -
  Spy49_1340c nusA 1345142..1346299 (-) 1158 ACI61618.1 Transcription termination protein NusA -
  Spy49_1341c - 1346474..1347010 (-) 537 ACI61619.1 transcription termination protein NusA-like protein -
  Spy49_1342c - 1347269..1347904 (-) 636 ACI61620.1 tRNA(m7G46)-methyltransferase -
  Spy49_1343c - 1347904..1348695 (-) 792 ACI61621.1 Conserved hypothetical protein -
  Spy49_1344c pptB 1348759..1349793 (-) 1035 ACI61622.1 Putative ABC transporter Regulator
  Spy49_1345c pptA 1349796..1350521 (-) 726 ACI61623.1 ABC transporter, ATP-binding protein Regulator
  Spy49_1346 hit 1350593..1351012 (+) 420 ACI61624.1 Putative cell-cycle regulation histidine triad (HIT) protein -
  Spy49_1347 - 1351009..1351365 (+) 357 ACI61625.1 Conserved hypothetical protein -
  Spy49_1348c - 1351476..1352759 (-) 1284 ACI61626.1 Putative transcription regulator -
  Spy49_1349c - 1352768..1353292 (-) 525 ACI61627.1 Histone acetyltransferase -
  Spy49_1350c - 1353267..1353728 (-) 462 ACI61628.1 Conserved hypothetical protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40231.49 Da        Isoelectric Point: 10.3257

>NTDB_id=20287 Spy49_1344c ACI61622.1 1348759..1349793(-) (pptB) [Streptococcus pyogenes NZ131]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSLSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=20287 Spy49_1344c ACI61622.1 1348759..1349793(-) (pptB) [Streptococcus pyogenes NZ131]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAGCAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAACGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCTGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427