Detailed information NTG0202842

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BK055_RS18190
• Genome accession: NZ_CP017775
• Coordinates: 3662047..3663210 (-)
• Length: 387 a.a.
• NCBI ID: WP_015387626.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 9912D
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3657047..3668210

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BK055_RS18160 (BK055_18160)	-	3657312..3657731 (-)	420	WP_061861586.1	TIGR03826 family flagellar region protein	-
BK055_RS18165 (BK055_18165)	comFC	3657805..3658494 (-)	690	WP_222103466.1	phosphoribosyltransferase family protein	Machinery gene
BK055_RS18170 (BK055_18170)	-	3658500..3658784 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
BK055_RS18175 (BK055_18175)	comFA	3658842..3660227 (-)	1386	WP_071182021.1	DEAD/DEAH box helicase	Machinery gene
BK055_RS18180 (BK055_18180)	-	3660335..3661183 (-)	849	WP_003151387.1	DegV family protein	-
BK055_RS18185 (BK055_18185)	degU	3661281..3661970 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BK055_RS18190 (BK055_18190)	degS	3662047..3663210 (-)	1164	WP_015387626.1	two-component sensor histidine kinase DegS	Regulator
BK055_RS18195 (BK055_18195)	-	3663433..3664080 (+)	648	WP_063636496.1	YigZ family protein	-
BK055_RS18200 (BK055_18200)	-	3664085..3665278 (+)	1194	WP_071182022.1	LCP family protein	-
BK055_RS18205 (BK055_18205)	-	3665378..3666454 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
BK055_RS18210 (BK055_18210)	tuaH	3666586..3667782 (-)	1197	WP_071182023.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 44971.80 Da
• Isoelectric Point: 6.8616

>NTDB_id=202842 BK055_RS18190 WP_015387626.1 3662047..3663210(-) (degS) [Bacillus velezensis strain 9912D]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLLERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=202842 BK055_RS18190 WP_015387626.1 3662047..3663210(-) (degS) [Bacillus velezensis strain 9912D]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCTGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTCCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.065	99.483	0.946