Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   BK055_RS16080 Genome accession   NZ_CP017775
Coordinates   3249062..3251368 (-) Length   768 a.a.
NCBI ID   WP_071181953.1    Uniprot ID   -
Organism   Bacillus velezensis strain 9912D     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3244062..3256368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BK055_RS16040 (BK055_16040) - 3244522..3244953 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  BK055_RS16045 (BK055_16045) - 3244953..3245294 (+) 342 WP_022553706.1 Na(+)/H(+) antiporter subunit C -
  BK055_RS16050 (BK055_16050) - 3245287..3246768 (+) 1482 WP_071181951.1 Na+/H+ antiporter subunit D -
  BK055_RS16055 (BK055_16055) - 3246774..3247250 (+) 477 WP_017419419.1 Na+/H+ antiporter subunit E -
  BK055_RS16060 (BK055_16060) - 3247250..3247534 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  BK055_RS16065 (BK055_16065) mnhG 3247518..3247892 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  BK055_RS16070 (BK055_16070) - 3247932..3248315 (-) 384 WP_065180456.1 hotdog fold thioesterase -
  BK055_RS16075 (BK055_16075) comA 3248337..3248981 (-) 645 WP_071181952.1 response regulator transcription factor Regulator
  BK055_RS16080 (BK055_16080) comP 3249062..3251368 (-) 2307 WP_071181953.1 sensor histidine kinase Regulator
  BK055_RS16085 (BK055_16085) comX 3251387..3251563 (-) 177 WP_017419424.1 competence pheromone ComX -
  BK055_RS16090 (BK055_16090) - 3251578..3252453 (-) 876 WP_026092320.1 polyprenyl synthetase family protein -
  BK055_RS16095 (BK055_16095) degQ 3252605..3252745 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  BK055_RS16100 (BK055_16100) - 3253210..3253551 (+) 342 WP_014418765.1 hypothetical protein -
  BK055_RS16105 (BK055_16105) - 3253558..3254781 (-) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 89356.62 Da        Isoelectric Point: 8.3541

>NTDB_id=202835 BK055_RS16080 WP_071181953.1 3249062..3251368(-) (comP) [Bacillus velezensis strain 9912D]
MKKFIRNFSIVLLFVSLFYVVHIIYFTQNGVLVGTYVVENNNHELQVVKLSKSTYGKYMGLKEGDRIIEISGKTPTEENI
RGQYLAKAEHMKIIRGNSKIDLHNTEFISLNSSYSFFIYIIPCILFALSMLCIFYIYKVNRVKDTYSAYILIIFLLCTSI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYFHFLYQYFKELKLKFSAGYVVSTLYILPVINIIIEIFQKHFAFQLVTNIN
LVTFFLEMMVVYTSIIFYGLVYRKKDHFYLLKVLLISNTIAFFPFTVFYIIPEVLFGQYIYSAIVTAPFLIIIPLALVYQ
FVVNKIYDIDFLLGRIRYYGFLSIIPTIGVVWLNILFDSKGNNFNIIQITVYVFLIFLAVFYIKELLDYKFRLKRFSEKY
NYQDSIYKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPYKKEFVKVTSEIGKIF
EVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=202835 BK055_RS16080 WP_071181953.1 3249062..3251368(-) (comP) [Bacillus velezensis strain 9912D]
TTGAAAAAATTCATTAGAAATTTTTCGATTGTATTGTTATTCGTCAGTCTCTTTTACGTCGTTCATATTATATATTTTAC
TCAAAACGGAGTTTTGGTAGGAACCTATGTGGTTGAAAACAATAACCATGAATTGCAGGTTGTAAAACTCTCCAAGTCTA
CGTATGGTAAATATATGGGCTTAAAAGAGGGAGACAGGATAATTGAAATAAGCGGAAAAACACCGACAGAAGAGAATATA
AGAGGTCAATATCTAGCGAAAGCTGAACATATGAAAATAATAAGGGGTAATAGTAAAATAGACTTACATAATACTGAGTT
TATTTCCTTAAATAGCTCTTATAGTTTTTTTATCTATATTATCCCATGCATATTATTTGCTTTAAGCATGTTATGCATTT
TTTATATTTATAAAGTTAACAGAGTAAAAGATACTTATTCAGCCTATATTTTGATTATTTTTTTATTGTGTACATCCATT
GCATATTTAAGCGCAGGTGGAGTAACTAGAGGATATGAAATAAACAGATATATTAACCTTTTTACATTTTTGAACGTACC
TGTATTATACTTTCACTTTTTGTATCAATACTTTAAAGAATTAAAATTGAAATTTTCAGCTGGTTATGTTGTGTCTACTC
TCTATATATTGCCGGTTATTAATATAATAATCGAGATATTCCAGAAGCATTTTGCCTTCCAACTTGTTACGAATATTAAT
TTAGTAACATTTTTTTTGGAAATGATGGTCGTCTATACATCCATTATTTTTTATGGACTAGTCTACCGAAAAAAGGATCA
CTTTTATTTGCTGAAAGTGTTACTTATATCTAATACCATAGCCTTTTTTCCGTTTACAGTATTTTATATTATACCTGAGG
TGTTGTTCGGACAGTATATTTATTCTGCTATAGTTACGGCACCATTTTTAATAATTATTCCATTAGCTTTAGTCTATCAA
TTCGTGGTCAATAAAATCTACGATATAGACTTCTTGTTGGGCAGAATCAGGTACTATGGTTTCCTTTCCATTATTCCGAC
TATTGGAGTTGTATGGCTGAATATATTATTCGACAGCAAGGGGAATAACTTTAACATTATTCAAATCACTGTATATGTAT
TTTTGATTTTTTTAGCGGTATTTTATATTAAGGAGTTATTAGACTACAAATTCCGCCTGAAACGTTTTTCAGAAAAATAT
AATTATCAAGACAGCATTTATAAATATACACAGCTTCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAA
AAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAGCTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTG
ATAAACAGAACAGTGAACCGAACTGGCAGCCGTATAAAAAAGAATTTGTTAAAGTCACATCAGAGATTGGCAAGATTTTT
GAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGAAAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAA
TACTCCGAGACTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATAT
TGCAGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAA
GCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCCTGCCACATAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTG
GGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACCCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGC
ATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTCCATTATGAAGACGACGGTGTC
GGCTGCAATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAACGCGTCCGTGCACTTGA
CGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(568-637)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.144

100

0.594


Multiple sequence alignment