Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   CJZ70_RS05615 Genome accession   NZ_CP022890
Coordinates   1086120..1087124 (+) Length   334 a.a.
NCBI ID   WP_003229285.1    Uniprot ID   P25144
Organism   Bacillus subtilis strain DKU_NT_02     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1081120..1092124
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ70_RS05590 (CJZ70_05590) murC 1081813..1083111 (+) 1299 WP_003229274.1 UDP-N-acetylmuramate--L-alanine ligase -
  CJZ70_RS05595 (CJZ70_05595) ytxG 1083273..1083695 (+) 423 WP_024572894.1 DUF948 domain-containing protein -
  CJZ70_RS05600 (CJZ70_05600) ytxH 1083726..1084181 (+) 456 WP_069964251.1 YtxH domain-containing protein -
  CJZ70_RS05605 (CJZ70_05605) ytxJ 1084205..1084531 (+) 327 WP_015251445.1 bacillithiol system redox-active protein YtxJ -
  CJZ70_RS05610 (CJZ70_05610) aroX 1084768..1085844 (+) 1077 WP_069964250.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase -
  CJZ70_RS05615 (CJZ70_05615) ccpA 1086120..1087124 (+) 1005 WP_003229285.1 catabolite control protein A Regulator
  CJZ70_RS05620 (CJZ70_05620) motP 1087187..1088005 (+) 819 WP_004398692.1 flagellar motor protein MotP -
  CJZ70_RS05625 (CJZ70_05625) motS 1087995..1088723 (+) 729 WP_095010602.1 flagellar motor protein MotS -
  CJZ70_RS05630 (CJZ70_05630) acuC 1088734..1089897 (-) 1164 WP_015714526.1 acetoin utilization protein AcuC -
  CJZ70_RS05635 (CJZ70_05635) acuB 1089894..1090538 (-) 645 WP_014480568.1 acetoin utilization AcuB family protein -
  CJZ70_RS05640 (CJZ70_05640) acuA 1090565..1091197 (-) 633 WP_014480567.1 acetoin utilization protein acetyltransferase AcuA -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 36940.34 Da        Isoelectric Point: 5.0249

>NTDB_id=202795 CJZ70_RS05615 WP_003229285.1 1086120..1087124(+) (ccpA) [Bacillus subtilis strain DKU_NT_02]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKRSPVPIVLAASVEEQEETPSVAI
DYEQAIYDAVKLLVDKGHTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKK
PTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRKSTKS

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=202795 CJZ70_RS05615 WP_003229285.1 1086120..1087124(+) (ccpA) [Bacillus subtilis strain DKU_NT_02]
ATGAGCAATATTACGATCTACGATGTAGCGAGAGAAGCTAATGTAAGCATGGCAACCGTTTCCCGTGTCGTGAACGGCAA
CCCGAATGTAAAACCGACAACGAGAAAAAAAGTCTTGGAAGCCATTGAACGTCTCGGTTACCGTCCAAACGCGGTGGCAA
GAGGACTGGCAAGTAAAAAAACAACAACTGTAGGTGTCATCATTCCCGATATCTCAAGCATTTTCTATTCAGAGCTTGCG
CGCGGAATTGAAGATATCGCGACAATGTATAAATACAATATTATTTTGAGCAACTCTGACCAAAACATGGAGAAAGAGCT
GCACTTGTTAAACACAATGCTCGGCAAACAAGTGGACGGCATCGTGTTTATGGGCGGAAACATTACGGACGAGCATGTGG
CGGAATTTAAGCGTTCTCCAGTGCCGATTGTACTTGCCGCTTCTGTAGAAGAGCAGGAGGAAACACCGTCAGTCGCTATC
GATTACGAACAGGCGATTTATGATGCCGTGAAGCTTTTGGTTGATAAAGGACATACAGACATCGCGTTCGTTTCCGGACC
AATGGCAGAACCGATCAACCGTTCGAAAAAACTCCAAGGCTACAAACGTGCGCTTGAAGAAGCGAACCTTCCGTTTAATG
AACAATTTGTAGCTGAAGGGGATTACACATATGATTCCGGACTCGAAGCACTGCAGCATCTGATGAGCCTGGATAAAAAA
CCGACAGCCATTCTTTCTGCAACTGATGAAATGGCACTCGGCATTATCCATGCCGCTCAGGATCAGGGCTTATCCATTCC
GGAGGATCTCGACATTATCGGTTTTGATAATACAAGATTAAGCCTTATGGTTCGTCCGCAGCTTTCAACAGTTGTTCAGC
CGACATATGATATCGGCGCCGTTGCGATGAGACTGCTGACGAAGCTCATGAATAAAGAGCCGGTTGAAGAGCATATCGTC
GAACTGCCGCACCGTATAGAGCTTAGAAAGTCAACCAAGTCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  PDB 1ZVV
  PDB 2FEP
  PDB 3OQM
  PDB 3OQN
  PDB 3OQO

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

54.545

98.802

0.539

  ccpA Streptococcus gordonii str. Challis substr. CH1

53.636

98.802

0.53

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

50.602

99.401

0.503


Multiple sequence alignment