Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | BKP58_RS21540 | Genome accession | NZ_CP017763 |
| Coordinates | 4029067..4030104 (+) | Length | 345 a.a. |
| NCBI ID | WP_031600685.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain 29R7-12 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4024067..4035104
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKP58_RS21515 (BKP58_21465) | rsbRD | 4024287..4025123 (+) | 837 | WP_014480262.1 | RsbT co-antagonist protein RsbRD | - |
| BKP58_RS21520 (BKP58_21470) | yqhB | 4025176..4026504 (-) | 1329 | WP_014480261.1 | hemolysin family protein | - |
| BKP58_RS21525 (BKP58_21475) | corA | 4026646..4027599 (+) | 954 | WP_014480260.1 | magnesium transporter CorA | - |
| BKP58_RS21530 (BKP58_21480) | - | 4027601..4027798 (+) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| BKP58_RS21535 (BKP58_21490) | comGA | 4028010..4029080 (+) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| BKP58_RS21540 (BKP58_21495) | comGB | 4029067..4030104 (+) | 1038 | WP_031600685.1 | comG operon protein ComGB | Machinery gene |
| BKP58_RS21545 (BKP58_21500) | comGC | 4030118..4030414 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| BKP58_RS21550 (BKP58_21505) | comGD | 4030404..4030835 (+) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| BKP58_RS21555 (BKP58_21510) | comGE | 4030819..4031166 (+) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| BKP58_RS21560 (BKP58_21515) | comGF | 4031192..4031575 (+) | 384 | WP_014480254.1 | ComG operon protein ComGF | Machinery gene |
| BKP58_RS21565 (BKP58_21520) | comGG | 4031576..4031950 (+) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| BKP58_RS21570 (BKP58_21525) | spoIITA | 4032021..4032200 (+) | 180 | WP_014480252.1 | YqzE family protein | - |
| BKP58_RS21575 (BKP58_21530) | yqzG | 4032242..4032568 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| BKP58_RS21580 (BKP58_21535) | tapA | 4032840..4033601 (+) | 762 | WP_014480251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BKP58_RS21585 (BKP58_21540) | sipW | 4033585..4034157 (+) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| BKP58_RS21590 (BKP58_21545) | tasA | 4034221..4035006 (+) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39592.99 Da Isoelectric Point: 9.6259
>NTDB_id=202705 BKP58_RS21540 WP_031600685.1 4029067..4030104(+) (comGB) [Bacillus subtilis strain 29R7-12]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKSVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKSVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=202705 BKP58_RS21540 WP_031600685.1 4029067..4030104(+) (comGB) [Bacillus subtilis strain 29R7-12]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGTGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGTGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |