Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | BKP64_RS11735 | Genome accession | NZ_CP017715 |
| Coordinates | 2527105..2528493 (+) | Length | 462 a.a. |
| NCBI ID | WP_070970176.1 | Uniprot ID | A0A1D9GMP1 |
| Organism | Marinobacter salinus strain Hb8 | ||
| Function | regulate pilin expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2522105..2533493
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKP64_RS11720 (BKP64_11720) | - | 2522786..2523619 (+) | 834 | WP_070973660.1 | outer membrane protein assembly factor BamD | - |
| BKP64_RS11725 (BKP64_11725) | - | 2523640..2525304 (-) | 1665 | WP_070970170.1 | NAD+ synthase | - |
| BKP64_RS11730 (BKP64_11730) | - | 2525398..2527047 (+) | 1650 | WP_070970173.1 | sensor histidine kinase | - |
| BKP64_RS11735 (BKP64_11735) | pilR | 2527105..2528493 (+) | 1389 | WP_070970176.1 | sigma-54-dependent transcriptional regulator | Regulator |
| BKP64_RS11740 (BKP64_11740) | - | 2528619..2529185 (+) | 567 | WP_070970178.1 | GspH/FimT family pseudopilin | - |
| BKP64_RS11745 (BKP64_11745) | - | 2529246..2529698 (-) | 453 | WP_083329212.1 | type IV pilin protein | - |
| BKP64_RS11750 (BKP64_11750) | - | 2529702..2532539 (-) | 2838 | WP_070970183.1 | pilus assembly protein | - |
| BKP64_RS11755 (BKP64_11755) | - | 2532536..2532904 (-) | 369 | WP_070970186.1 | hypothetical protein | - |
| BKP64_RS11760 (BKP64_11760) | - | 2532938..2533411 (-) | 474 | WP_070970189.1 | PilX N-terminal domain-containing pilus assembly protein | - |
Sequence
Protein
Download Length: 462 a.a. Molecular weight: 50643.93 Da Isoelectric Point: 5.2700
>NTDB_id=202203 BKP64_RS11735 WP_070970176.1 2527105..2528493(+) (pilR) [Marinobacter salinus strain Hb8]
MTTHTALIVDDEPDIRDLLEITLTRMGIKALTAADLGSARKLLGEHTFHLCLTDMNLPDGNGIELVQWIQQHSPTTPVAV
ITAYGNMETAIESLKAGAFDFVSKPVELPRLRDLVSSALKLSLAKPEQETPEDEPGLLLGNSLQIKKLRKQTRKLARSQA
PVFISGESGSGKELVARMIHLQGPRRDGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVESKDGLFRSANGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRLLSATHKNLPELVQEGSFRQDLFYRINVIELAVPPLRERPDDIALLA
NHILGRIAREYECDPATLTPDAIDRLQGYDFPGNVRELENILERAFTLCDSDQIGPQDLHLGNGAQSPTTASGIITQGQG
ADGNSIPVPEGEIDLEGYLESIERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME
MTTHTALIVDDEPDIRDLLEITLTRMGIKALTAADLGSARKLLGEHTFHLCLTDMNLPDGNGIELVQWIQQHSPTTPVAV
ITAYGNMETAIESLKAGAFDFVSKPVELPRLRDLVSSALKLSLAKPEQETPEDEPGLLLGNSLQIKKLRKQTRKLARSQA
PVFISGESGSGKELVARMIHLQGPRRDGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVESKDGLFRSANGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRLLSATHKNLPELVQEGSFRQDLFYRINVIELAVPPLRERPDDIALLA
NHILGRIAREYECDPATLTPDAIDRLQGYDFPGNVRELENILERAFTLCDSDQIGPQDLHLGNGAQSPTTASGIITQGQG
ADGNSIPVPEGEIDLEGYLESIERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME
Nucleotide
Download Length: 1389 bp
>NTDB_id=202203 BKP64_RS11735 WP_070970176.1 2527105..2528493(+) (pilR) [Marinobacter salinus strain Hb8]
ATGACCACTCATACAGCCCTGATTGTTGATGATGAACCGGATATCCGGGACTTGCTGGAAATCACCCTCACCCGCATGGG
AATCAAGGCCCTGACGGCCGCGGACCTGGGAAGTGCTCGCAAGCTTTTGGGTGAGCATACCTTTCACCTCTGCCTGACGG
ACATGAACTTGCCGGATGGCAATGGCATCGAACTGGTGCAATGGATTCAGCAGCACTCACCTACGACGCCGGTGGCCGTC
ATTACCGCCTATGGCAACATGGAAACTGCCATTGAATCCCTGAAGGCGGGCGCTTTTGATTTTGTCTCCAAGCCAGTCGA
GCTACCGCGACTGCGAGACCTCGTGAGCAGCGCGCTCAAGCTTTCACTCGCCAAGCCGGAACAGGAGACTCCCGAGGACG
AGCCGGGACTGCTACTGGGCAATTCTCTCCAGATAAAGAAACTGCGAAAACAGACCCGGAAACTGGCTCGCAGTCAGGCA
CCCGTTTTTATCAGCGGCGAATCAGGCAGCGGCAAGGAACTGGTCGCCCGGATGATTCACCTTCAGGGACCGAGACGTGA
CGGTCCTTTCATTGCCGTTAACTGCGGGGCAATTCCCTCTGAGCTGATGGAGAGTGAGTTCTTTGGTCACAAGAAGGGCA
GTTTTACCGGGGCGGTAGAAAGCAAGGACGGCCTTTTCCGTTCGGCCAACGGCGGCACGCTGTTTCTCGATGAAGTGGCA
GACCTCCCGCTTGCCATGCAGGTAAAGCTACTCCGTGCCATTCAGGAAAAAGCGGTTCGCCCGGTGGGAGACACCAAAGA
AGTTCCCGTGGACATCCGGTTACTCAGTGCGACCCACAAGAACCTGCCGGAACTGGTCCAGGAGGGTAGTTTCCGCCAAG
ACCTGTTTTACCGCATCAACGTCATTGAGCTGGCGGTTCCGCCGCTCCGGGAAAGGCCGGATGACATTGCTTTGCTGGCC
AATCACATCCTCGGCAGGATCGCCCGGGAATATGAGTGCGATCCGGCAACGCTGACCCCGGATGCCATTGATCGCTTGCA
AGGCTATGATTTCCCGGGAAATGTCCGGGAGCTCGAAAACATTCTGGAGCGGGCCTTTACCCTCTGTGATTCGGACCAGA
TTGGCCCCCAGGATCTGCACCTGGGAAACGGAGCGCAGTCGCCCACGACGGCGTCCGGAATTATTACGCAGGGGCAAGGG
GCTGACGGAAACAGCATTCCAGTGCCGGAAGGGGAAATAGACCTCGAAGGCTACCTGGAAAGCATTGAGCGTCAGGCTAT
TGAAAAAGCTCTGGAAGCAACGCGATGGAACAAAACGGCCGCGGCCAAAAGACTGGGGATCAGTTTTCGGGCGTTACGGT
ATCGATTGAAGAAATTGGGGATGGAGTGA
ATGACCACTCATACAGCCCTGATTGTTGATGATGAACCGGATATCCGGGACTTGCTGGAAATCACCCTCACCCGCATGGG
AATCAAGGCCCTGACGGCCGCGGACCTGGGAAGTGCTCGCAAGCTTTTGGGTGAGCATACCTTTCACCTCTGCCTGACGG
ACATGAACTTGCCGGATGGCAATGGCATCGAACTGGTGCAATGGATTCAGCAGCACTCACCTACGACGCCGGTGGCCGTC
ATTACCGCCTATGGCAACATGGAAACTGCCATTGAATCCCTGAAGGCGGGCGCTTTTGATTTTGTCTCCAAGCCAGTCGA
GCTACCGCGACTGCGAGACCTCGTGAGCAGCGCGCTCAAGCTTTCACTCGCCAAGCCGGAACAGGAGACTCCCGAGGACG
AGCCGGGACTGCTACTGGGCAATTCTCTCCAGATAAAGAAACTGCGAAAACAGACCCGGAAACTGGCTCGCAGTCAGGCA
CCCGTTTTTATCAGCGGCGAATCAGGCAGCGGCAAGGAACTGGTCGCCCGGATGATTCACCTTCAGGGACCGAGACGTGA
CGGTCCTTTCATTGCCGTTAACTGCGGGGCAATTCCCTCTGAGCTGATGGAGAGTGAGTTCTTTGGTCACAAGAAGGGCA
GTTTTACCGGGGCGGTAGAAAGCAAGGACGGCCTTTTCCGTTCGGCCAACGGCGGCACGCTGTTTCTCGATGAAGTGGCA
GACCTCCCGCTTGCCATGCAGGTAAAGCTACTCCGTGCCATTCAGGAAAAAGCGGTTCGCCCGGTGGGAGACACCAAAGA
AGTTCCCGTGGACATCCGGTTACTCAGTGCGACCCACAAGAACCTGCCGGAACTGGTCCAGGAGGGTAGTTTCCGCCAAG
ACCTGTTTTACCGCATCAACGTCATTGAGCTGGCGGTTCCGCCGCTCCGGGAAAGGCCGGATGACATTGCTTTGCTGGCC
AATCACATCCTCGGCAGGATCGCCCGGGAATATGAGTGCGATCCGGCAACGCTGACCCCGGATGCCATTGATCGCTTGCA
AGGCTATGATTTCCCGGGAAATGTCCGGGAGCTCGAAAACATTCTGGAGCGGGCCTTTACCCTCTGTGATTCGGACCAGA
TTGGCCCCCAGGATCTGCACCTGGGAAACGGAGCGCAGTCGCCCACGACGGCGTCCGGAATTATTACGCAGGGGCAAGGG
GCTGACGGAAACAGCATTCCAGTGCCGGAAGGGGAAATAGACCTCGAAGGCTACCTGGAAAGCATTGAGCGTCAGGCTAT
TGAAAAAGCTCTGGAAGCAACGCGATGGAACAAAACGGCCGCGGCCAAAAGACTGGGGATCAGTTTTCGGGCGTTACGGT
ATCGATTGAAGAAATTGGGGATGGAGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Pseudomonas aeruginosa PAK |
62.5 |
100 |
0.628 |
| pilR | Acinetobacter baumannii strain A118 |
52.597 |
100 |
0.526 |
| luxO | Vibrio cholerae strain A1552 |
36.703 |
98.485 |
0.361 |