Detailed information NTG0202144

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: BKX93_RS15065
• Genome accession: NZ_CP017707
• Coordinates: 3240317..3241633 (+)
• Length: 438 a.a.
• NCBI ID: WP_046167559.1
• Uniprot ID: A0A1D9LIS8
• Organism: Chromobacterium vaccinii strain 21-1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3235317..3246633

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BKX93_RS15050 (BKX93_15050)	-	3235861..3236319 (-)	459	WP_046167560.1	GNAT family N-acetyltransferase	-
BKX93_RS15055 (BKX93_15055)	parC	3236417..3238768 (+)	2352	WP_046155321.1	DNA topoisomerase IV subunit A	-
BKX93_RS15060 (BKX93_15060)	-	3238768..3240324 (+)	1557	WP_046155275.1	ATP-binding protein	-
BKX93_RS15065 (BKX93_15065)	pilR	3240317..3241633 (+)	1317	WP_046167559.1	sigma-54 dependent transcriptional regulator	Regulator
BKX93_RS15070 (BKX93_15070)	-	3241662..3243047 (-)	1386	WP_070980438.1	radical SAM protein	-
BKX93_RS25390	-	3243237..3243410 (-)	174	WP_021478861.1	hypothetical protein	-
BKX93_RS15075 (BKX93_15075)	-	3243502..3244803 (-)	1302	WP_070980439.1	hypothetical protein	-
BKX93_RS15080 (BKX93_15080)	-	3244837..3246114 (-)	1278	WP_046167555.1	hypothetical protein	-
BKX93_RS25395	-	3246241..3246399 (-)	159	WP_021478864.1	hypothetical protein	-

Sequence

Protein

• Length: 438 a.a.
• Molecular weight: 47701.81 Da
• Isoelectric Point: 5.4349

>NTDB_id=202144 BKX93_RS15065 WP_046167559.1 3240317..3241633(+) (pilR) [Chromobacterium vaccinii strain 21-1]
MTKTLRVLIVDDEPDIRELLELTLLKMGLAPACAGSVAEARAALDAGGFDLALTDMRLPDGEGLEVVNHIGESGLDVPIA
VITAYGSADNAVRAMKAGAFDYLQKPVSLAQLRSLVKTALKVETPVAKAVAQQRLLGESPAIQDVLRLADKLSRSQAAVY
IGGESGTGKEQAARLIHELGARADKPFVAVNCGAIPETLMESEFFGCRKGAFTGADADRDGFFQQAQGGTLFLDEVAELP
LAMQVKLLRAIQEKTVRKLGASQEEALDVRIICATHRDLAARVESGQFRQDLYYRLNVLPLKMPPLRELRDDIPLFAERL
LQRFGGAAAPQLSADARRALLDYAYPGNFRELENILERAVALAAGPSLSRADLQLTPCADYAPELGSDEPLQDYLDRVER
EAIVKALEGTRYNRTQAAKKLGVTFRSLRYRMERLGVK

Nucleotide

• Length: 1317 bp

>NTDB_id=202144 BKX93_RS15065 WP_046167559.1 3240317..3241633(+) (pilR) [Chromobacterium vaccinii strain 21-1]
ATGACTAAGACACTGCGCGTATTGATCGTCGACGACGAGCCGGACATCCGGGAGCTGTTGGAGCTGACCTTGCTGAAAAT
GGGCCTCGCCCCGGCATGCGCCGGCAGCGTCGCCGAGGCGCGCGCCGCGCTGGACGCGGGAGGCTTCGATCTGGCGCTGA
CCGATATGCGGCTGCCTGACGGCGAGGGTCTGGAGGTGGTCAACCACATCGGCGAGTCCGGACTGGATGTGCCCATCGCC
GTGATCACCGCCTACGGCAGCGCCGACAATGCGGTGCGGGCGATGAAGGCCGGCGCTTTCGACTATCTGCAGAAGCCGGT
CAGCCTGGCCCAGCTGCGCAGCCTGGTGAAGACCGCGCTGAAGGTGGAAACGCCGGTCGCCAAGGCGGTCGCGCAGCAAA
GGCTGCTCGGTGAGTCGCCGGCGATCCAGGACGTGCTGCGGCTGGCGGACAAGCTGTCGCGCAGCCAGGCCGCGGTGTAC
ATCGGCGGCGAGTCCGGCACCGGCAAGGAACAGGCGGCGCGGCTGATCCACGAGCTGGGGGCGCGCGCCGACAAGCCTTT
CGTCGCCGTCAACTGCGGCGCGATTCCGGAAACCCTGATGGAGAGTGAATTCTTCGGCTGCCGCAAGGGCGCGTTCACCG
GCGCCGACGCCGACCGCGACGGCTTTTTCCAGCAGGCCCAGGGCGGCACGCTGTTCCTGGACGAAGTGGCCGAGCTGCCG
CTGGCGATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAAAAGACCGTGCGCAAGCTGGGCGCCAGCCAGGAAGAGGCCTT
GGACGTCCGCATCATCTGCGCCACCCACCGTGATCTGGCGGCGCGGGTGGAGTCGGGGCAGTTCCGCCAGGACCTGTATT
ACCGCCTCAATGTGCTGCCGCTGAAGATGCCGCCATTGCGCGAGCTGCGCGACGACATCCCCCTGTTCGCCGAGAGGCTG
CTGCAGCGCTTCGGCGGCGCGGCGGCGCCGCAGTTGTCCGCCGACGCGCGCCGCGCGCTGCTGGACTACGCTTATCCCGG
CAACTTCCGCGAACTGGAAAACATACTGGAGCGGGCGGTGGCTTTGGCCGCCGGCCCTTCGCTGTCCCGCGCCGACCTGC
AGCTGACCCCCTGCGCCGACTACGCGCCGGAGCTCGGCAGCGACGAGCCGCTGCAGGATTATCTGGATCGAGTCGAGCGA
GAGGCCATCGTCAAGGCGCTGGAAGGCACCCGTTACAACCGTACCCAGGCCGCGAAAAAACTGGGCGTCACCTTCCGGTC
GCTGAGGTATCGGATGGAGCGGCTGGGGGTGAAGTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (395-434)

• Response regulator receiver domain (Response_reg) (7-116)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

3D structure

• AlphaFold DB: A0A1D9LIS8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	58.864	100	0.591
pilR	Acinetobacter baumannii strain A118	44.978	100	0.47
luxO	Vibrio cholerae strain A1552	40.288	95.205	0.384