Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BS1321_RS21685 | Genome accession | NZ_CP017704 |
| Coordinates | 4488944..4490029 (+) | Length | 361 a.a. |
| NCBI ID | WP_411836501.1 | Uniprot ID | - |
| Organism | Peribacillus simplex NBRC 15720 = DSM 1321 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4483944..4495029
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS1321_RS21655 (BS1321_21315) | - | 4484673..4484846 (-) | 174 | WP_034308396.1 | DUF2759 domain-containing protein | - |
| BS1321_RS21660 (BS1321_21320) | - | 4485080..4485706 (+) | 627 | WP_063233059.1 | MBL fold metallo-hydrolase | - |
| BS1321_RS21665 (BS1321_21325) | - | 4486071..4487171 (+) | 1101 | WP_063233176.1 | class I SAM-dependent methyltransferase | - |
| BS1321_RS21670 (BS1321_21330) | - | 4487224..4487466 (-) | 243 | WP_034308393.1 | DUF2626 domain-containing protein | - |
| BS1321_RS21675 (BS1321_21335) | - | 4487552..4488253 (-) | 702 | WP_063233060.1 | helix-turn-helix transcriptional regulator | - |
| BS1321_RS21680 (BS1321_21340) | - | 4488469..4488849 (+) | 381 | WP_063233061.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| BS1321_RS21685 (BS1321_21345) | comGA | 4488944..4490029 (+) | 1086 | WP_411836501.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BS1321_RS21690 (BS1321_21350) | comGB | 4490013..4491047 (+) | 1035 | WP_063233062.1 | competence type IV pilus assembly protein ComGB | - |
| BS1321_RS21695 (BS1321_21355) | comGC | 4491125..4491436 (+) | 312 | WP_063233178.1 | competence type IV pilus major pilin ComGC | - |
| BS1321_RS21700 (BS1321_21360) | comGD | 4491444..4491887 (+) | 444 | WP_063233063.1 | competence type IV pilus minor pilin ComGD | - |
| BS1321_RS21705 (BS1321_21365) | - | 4491874..4492212 (+) | 339 | WP_063233064.1 | hypothetical protein | - |
| BS1321_RS21710 (BS1321_21370) | comGF | 4492160..4492639 (+) | 480 | WP_081112903.1 | competence type IV pilus minor pilin ComGF | - |
| BS1321_RS21715 (BS1321_21375) | comGG | 4492632..4493018 (+) | 387 | WP_063233066.1 | competence type IV pilus minor pilin ComGG | - |
| BS1321_RS21720 (BS1321_21380) | - | 4493130..4493315 (+) | 186 | WP_063233067.1 | YqzE family protein | - |
| BS1321_RS21725 (BS1321_21385) | - | 4493362..4494159 (-) | 798 | WP_063233068.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 361 a.a. Molecular weight: 40259.00 Da Isoelectric Point: 9.2521
>NTDB_id=202071 BS1321_RS21685 WP_411836501.1 4488944..4490029(+) (comGA) [Peribacillus simplex NBRC 15720 = DSM 1321]
MNELISIEKTAEKILTRAVQESASDIHIFFRREGPLIQFRIDNKLVPQETLSFFEAERLIAHLKFLASMDIGEKRRPQSG
AITINLANQVVGLRLSTLPTAHLESLVIRLIPQQNILPLKQLSLFPNTVQKLIALLKHSHGMLIFTGPTGSGKTTTLYSL
LHHAHEMINRNIITLEDPIENVSQKVLQVQINEKAGITYSVGLKAVLRHDPDVIMVGEVRDAETAKIAVRAALTGHLILT
TMHTRDAQGAISRLLEFGVSLLEVEQSLIGVTAQRLVELRCLPCKGECALACKMTARNKRASVYELLYGKSLAEVLRIMG
DEKGKATVSYRQLKDEIGKAVAMGYVDSQEYERLVYHETKK
MNELISIEKTAEKILTRAVQESASDIHIFFRREGPLIQFRIDNKLVPQETLSFFEAERLIAHLKFLASMDIGEKRRPQSG
AITINLANQVVGLRLSTLPTAHLESLVIRLIPQQNILPLKQLSLFPNTVQKLIALLKHSHGMLIFTGPTGSGKTTTLYSL
LHHAHEMINRNIITLEDPIENVSQKVLQVQINEKAGITYSVGLKAVLRHDPDVIMVGEVRDAETAKIAVRAALTGHLILT
TMHTRDAQGAISRLLEFGVSLLEVEQSLIGVTAQRLVELRCLPCKGECALACKMTARNKRASVYELLYGKSLAEVLRIMG
DEKGKATVSYRQLKDEIGKAVAMGYVDSQEYERLVYHETKK
Nucleotide
Download Length: 1086 bp
>NTDB_id=202071 BS1321_RS21685 WP_411836501.1 4488944..4490029(+) (comGA) [Peribacillus simplex NBRC 15720 = DSM 1321]
ATGAATGAATTGATATCGATTGAAAAGACCGCAGAAAAAATACTAACCCGTGCAGTACAGGAATCGGCATCGGATATCCA
CATTTTTTTTCGCAGAGAGGGACCTCTCATCCAATTTAGGATAGACAATAAGCTTGTTCCCCAGGAAACATTATCATTCT
TTGAAGCTGAAAGGCTGATCGCTCATTTGAAGTTCCTTGCCTCGATGGATATAGGGGAGAAAAGGAGGCCCCAGAGTGGT
GCCATCACCATCAATTTAGCTAACCAGGTGGTCGGACTCCGCCTTTCCACTTTACCCACTGCCCATCTCGAAAGTTTGGT
CATCCGCTTAATACCCCAACAGAATATCCTTCCTCTCAAACAGTTATCCTTATTTCCAAACACCGTTCAAAAATTGATTG
CACTCCTGAAGCATTCCCATGGCATGCTCATATTTACCGGTCCGACCGGCAGTGGAAAAACCACGACACTTTATTCCTTG
CTTCACCATGCCCATGAAATGATCAATCGAAATATTATTACACTTGAAGATCCCATTGAAAATGTATCCCAAAAGGTATT
GCAAGTCCAAATCAATGAAAAGGCGGGCATTACGTATTCTGTCGGTCTAAAAGCTGTCCTAAGGCATGACCCTGACGTCA
TCATGGTTGGGGAAGTCAGGGATGCAGAAACAGCCAAAATCGCAGTGCGTGCCGCATTAACAGGTCATTTGATACTTACA
ACCATGCATACAAGGGACGCCCAGGGCGCCATCTCCAGGTTACTGGAGTTTGGTGTCAGCTTGCTTGAGGTTGAACAGAG
TTTGATTGGCGTGACAGCACAGCGGCTGGTTGAGTTGCGATGTCTTCCATGTAAAGGGGAGTGTGCTTTAGCTTGCAAAA
TGACTGCCAGGAATAAAAGGGCAAGTGTATATGAATTGCTATATGGAAAAAGCCTGGCTGAGGTTCTCCGGATAATGGGA
GATGAAAAGGGAAAGGCAACGGTCAGCTACCGCCAATTGAAGGATGAAATCGGAAAAGCGGTTGCGATGGGCTATGTAGA
TTCTCAGGAATATGAACGGCTGGTATACCATGAAACCAAAAAGTAA
ATGAATGAATTGATATCGATTGAAAAGACCGCAGAAAAAATACTAACCCGTGCAGTACAGGAATCGGCATCGGATATCCA
CATTTTTTTTCGCAGAGAGGGACCTCTCATCCAATTTAGGATAGACAATAAGCTTGTTCCCCAGGAAACATTATCATTCT
TTGAAGCTGAAAGGCTGATCGCTCATTTGAAGTTCCTTGCCTCGATGGATATAGGGGAGAAAAGGAGGCCCCAGAGTGGT
GCCATCACCATCAATTTAGCTAACCAGGTGGTCGGACTCCGCCTTTCCACTTTACCCACTGCCCATCTCGAAAGTTTGGT
CATCCGCTTAATACCCCAACAGAATATCCTTCCTCTCAAACAGTTATCCTTATTTCCAAACACCGTTCAAAAATTGATTG
CACTCCTGAAGCATTCCCATGGCATGCTCATATTTACCGGTCCGACCGGCAGTGGAAAAACCACGACACTTTATTCCTTG
CTTCACCATGCCCATGAAATGATCAATCGAAATATTATTACACTTGAAGATCCCATTGAAAATGTATCCCAAAAGGTATT
GCAAGTCCAAATCAATGAAAAGGCGGGCATTACGTATTCTGTCGGTCTAAAAGCTGTCCTAAGGCATGACCCTGACGTCA
TCATGGTTGGGGAAGTCAGGGATGCAGAAACAGCCAAAATCGCAGTGCGTGCCGCATTAACAGGTCATTTGATACTTACA
ACCATGCATACAAGGGACGCCCAGGGCGCCATCTCCAGGTTACTGGAGTTTGGTGTCAGCTTGCTTGAGGTTGAACAGAG
TTTGATTGGCGTGACAGCACAGCGGCTGGTTGAGTTGCGATGTCTTCCATGTAAAGGGGAGTGTGCTTTAGCTTGCAAAA
TGACTGCCAGGAATAAAAGGGCAAGTGTATATGAATTGCTATATGGAAAAAGCCTGGCTGAGGTTCTCCGGATAATGGGA
GATGAAAAGGGAAAGGCAACGGTCAGCTACCGCCAATTGAAGGATGAAATCGGAAAAGCGGTTGCGATGGGCTATGTAGA
TTCTCAGGAATATGAACGGCTGGTATACCATGAAACCAAAAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
55.493 |
98.338 |
0.546 |
| pilB | Haemophilus influenzae 86-028NP |
39.08 |
96.399 |
0.377 |
| pilB | Haemophilus influenzae Rd KW20 |
37.931 |
96.399 |
0.366 |