Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   FORC62_RS09990 Genome accession   NZ_CP022582
Coordinates   1931903..1932892 (-) Length   329 a.a.
NCBI ID   WP_044424938.1    Uniprot ID   -
Organism   Staphylococcus aureus strain FORC_062     
Function   repress the expression of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1926903..1937892
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC62_RS09975 (FORC62_1823) acsA 1928104..1929810 (-) 1707 WP_000862102.1 acetate--CoA ligase -
  FORC62_RS09980 (FORC62_1824) - 1929979..1930611 (+) 633 WP_044424884.1 GNAT family N-acetyltransferase -
  FORC62_RS09985 (FORC62_1825) - 1930636..1931805 (+) 1170 WP_001184011.1 acetoin utilization protein AcuC -
  FORC62_RS09990 (FORC62_1826) ccpA 1931903..1932892 (-) 990 WP_044424938.1 catabolite control protein A Regulator
  FORC62_RS09995 - 1932965..1933078 (-) 114 WP_001788994.1 hypothetical protein -
  FORC62_RS10000 (FORC62_1827) - 1933432..1934523 (-) 1092 WP_000066378.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase -
  FORC62_RS10005 - 1934978..1935061 (-) 84 WP_031761406.1 hypothetical protein -
  FORC62_RS10010 (FORC62_1828) - 1935217..1936575 (-) 1359 WP_000193903.1 hypothetical protein -
  FORC62_RS10015 (FORC62_1829) - 1936649..1937140 (-) 492 WP_000383814.1 DUF948 domain-containing protein -

Sequence

Protein


Download         Length: 329 a.a.        Molecular weight: 36046.21 Da        Isoelectric Point: 5.5023

>NTDB_id=201837 FORC62_RS09990 WP_044424938.1 1931903..1932892(-) (ccpA) [Staphylococcus aureus strain FORC_062]
MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLAR
GLEDIATMYKYHSIISNSDNDPEKDKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNID
FTEAAKEITGELIEKGAKSFALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPH
RIEYRGTTK

Nucleotide


Download         Length: 990 bp        

>NTDB_id=201837 FORC62_RS09990 WP_044424938.1 1931903..1932892(-) (ccpA) [Staphylococcus aureus strain FORC_062]
ATGACAGTTACTATATATGATGTAGCAAGAGAAGCGCGTGTCTCTATGGCCACAGTGTCGCGTGTTGTTAATGGGAACCA
AAATGTTAAAGCAGAAACTAAAAATAAAGTTAACGAAGTCATTAAGCGTTTGAATTATCGTCCAAATGCTGTTGCTAGAG
GTTTAGCTAGTAAAAAGACAACAACAGTAGGTGTGATCATTCCAGATATATCTAATATCTATTATTCACAACTTGCTCGT
GGACTTGAAGATATTGCAACAATGTATAAATATCACTCAATTATTTCAAATTCAGATAACGATCCTGAAAAGGATAAAGA
AATTTTTAATAACTTATTAAGTAAACAGGTTGATGGTATTATTTTCCTTGGTGGTACAATTACTGAAGAAATGAAAGAAT
TGATAAATCAATCATCTGTACCTGTAGTAGTATCAGGAACAAATGGTAAGGATGCACATATAGCATCAGTTAATATTGAT
TTTACTGAAGCTGCGAAAGAAATTACGGGAGAATTAATTGAAAAAGGCGCTAAATCATTTGCTTTAGTAGGTGGAGAACA
TTCTAAAAAAGCTCAAGAAGATGTTTTAGAAGGTTTAACTGAAGTGTTAAATAAAAATGGCCTTCAATTAGGTGATACAT
TGAATTGTTCTGGTGCTGAAAGTTATAAAGAAGGCGTAAAAGCTTTTGCTAAAATGAAAGGCAATTTGCCAGATGCCATT
TTATGTATCAGCGACGAAGAAGCAATTGGTATTATGCATAGTGCAATGGATGCTGGTATTAAAGTTCCAGAGGAATTACA
AATTATTAGTTTCAATAATACACGATTAGTTGAGATGGTTAGACCACAACTTTCTAGTGTTATTCAACCATTATATGATA
TCGGTGCAGTAGGGATGCGCTTATTAACAAAATATATGAACGATGAAAAGATAGAAGAACCAAATGTAGTTTTACCTCAC
AGAATTGAATACCGAGGAACTACAAAATAA

Domains

Predicted by InterProScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(171-328)

Bacterial regulatory proteins, lacI family (LacI)

(4-49)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

47.576

100

0.477
  ccpA Streptococcus gordonii str. Challis substr. CH1

46.809

100

0.468
  ccpA Streptococcus pneumoniae D39

45.897

100

0.459