Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   Spy49_1822 Genome accession   CP000829
Coordinates   1814978..1815784 (+) Length   268 a.a.
NCBI ID   ACI62064.1    Uniprot ID   -
Organism   Streptococcus pyogenes NZ131     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1809978..1820784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Spy49_1820c - 1813005..1813484 (-) 480 ACI62062.1 hypothetical protein -
  Spy49_1821 htrA 1813696..1814919 (+) 1224 ACI62063.1 Endopeptidase degP Regulator
  Spy49_1822 spo0J 1814978..1815784 (+) 807 ACI62064.1 Chromosome partitioning protein parB Regulator

Sequence


Protein


Download         Length: 268 a.a.        Molecular weight: 30274.36 Da        Isoelectric Point: 10.3332

>NTDB_id=20169 Spy49_1822 ACI62064.1 1814978..1815784(+) (spo0J) [Streptococcus pyogenes NZ131]
MFLILSRNSLMTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKM
AGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPII
KTIEEGKISAGHARALLTLSDDKQQLYLTYKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNM
KLTANHSGYLQISFSNDDELNRIINKLK

Nucleotide


Download         Length: 807 bp        

>NTDB_id=20169 Spy49_1822 ACI62064.1 1814978..1815784(+) (spo0J) [Streptococcus pyogenes NZ131]
ATGTTTCTTATTCTATCCAGGAACTCCCTTATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAA
TCCCTATCAGCCAAGGATACAATTTAATCAAAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTC
AACCTATTATTGTTCGAAAATCTGACATTTTTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATG
GCTGGTCTAAAAAAAGTTCCAGCTATTATCAAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTT
ACAACGTTCTAACCTTAACGCTATCGAAGAAGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATG
AGATTGCTAAATATATGGGAAAATCAAGACCTTATATTAGCAACACCTTACGTCTGTTACAACTCCCAGCACCTATCATT
AAAACAATTGAAGAAGGAAAAATTAGTGCGGGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTA
CCTCACTTATAAAATACAAAATGAAGGCCTAAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGC
TATCTAAAAAAACTAAAAATATTTTTGCCACTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATG
AAGCTGACAGCAAACCATAGTGGGTACCTTCAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCT
AAAGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.366

95.896

0.56


Multiple sequence alignment