Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/blpH   Type   Regulator
Locus tag   CG712_RS10255 Genome accession   NZ_CP022547
Coordinates   847010..847813 (+) Length   267 a.a.
NCBI ID   WP_224103634.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain B59671     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 842010..852813
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG712_RS04385 (CG712_04420) - 843376..843618 (-) 243 WP_096811635.1 Blp family class II bacteriocin -
  CG712_RS10720 (CG712_04425) - 843869..844270 (-) 402 WP_011226490.1 hypothetical protein -
  CG712_RS04400 (CG712_04435) - 845257..845487 (-) 231 WP_011226494.1 bacteriocin class II family protein -
  CG712_RS04405 (CG712_04440) comE/blpR 845742..846473 (+) 732 WP_002948869.1 LytR/AlgR family response regulator transcription factor Regulator
  CG712_RS10255 comD/blpH 847010..847813 (+) 804 WP_224103634.1 ATP-binding protein Regulator
  CG712_RS04415 (CG712_04450) - 847831..847992 (-) 162 WP_011226496.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  CG712_RS04420 (CG712_04455) comB 848007..849374 (-) 1368 WP_096811636.1 bacteriocin secretion accessory protein Regulator
  CG712_RS04425 (CG712_04460) comA/nlmT 849390..851543 (-) 2154 WP_157769910.1 peptide cleavage/export ABC transporter Regulator

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30835.17 Da        Isoelectric Point: 4.8309

>NTDB_id=201681 CG712_RS10255 WP_224103634.1 847010..847813(+) (comD/blpH) [Streptococcus thermophilus strain B59671]
MYLENTTHSSTLELRKLCVVISLVLFFIMIVFLERNIREMIQGQLDFQKNLQLENLYTYNKHIECLYNSVRSFRHDYSNL
LVTLRLGIDKDDMDIVKEVYDSVLQESDKRLNTRNFDLARLVNIQDNTLKSLLSAKVLQAEEEGIEAQISIPEPIHLIGM
EILDFIIVTSIFLDNAIEGAIQTQNHKITISFWEDHRSQLLSISNTISEEQTETKTIFERGVSNKGRERGIGLANVTEIL
DNYINVNLETQSNNFSFTQQLTITKKA

Nucleotide


Download         Length: 804 bp        

>NTDB_id=201681 CG712_RS10255 WP_224103634.1 847010..847813(+) (comD/blpH) [Streptococcus thermophilus strain B59671]
ATGTATCTTGAAAACACTACTCACTCTTCAACTTTGGAGCTTCGAAAACTCTGTGTTGTTATTTCACTTGTCCTCTTCTT
CATTATGATTGTCTTTTTAGAAAGAAACATTCGTGAAATGATTCAAGGACAATTGGACTTCCAGAAAAATCTCCAGCTAG
AGAATCTCTACACCTACAATAAACATATTGAATGTCTCTACAATTCTGTTCGTAGTTTTAGACACGATTATAGTAATCTC
TTAGTCACATTACGATTGGGGATAGATAAAGACGATATGGATATTGTCAAAGAAGTCTATGATAGTGTGCTTCAAGAATC
CGATAAACGATTAAATACAAGAAACTTTGACTTAGCTAGACTCGTTAATATTCAGGATAATACTTTGAAAAGCCTTCTGT
CCGCAAAAGTTTTACAAGCAGAAGAAGAAGGTATTGAAGCTCAGATTAGCATCCCAGAACCCATCCACTTGATTGGGATG
GAGATTCTGGACTTCATTATCGTCACTTCTATTTTTTTAGATAACGCTATTGAAGGTGCCATTCAAACTCAAAACCATAA
AATTACTATTAGCTTTTGGGAAGATCATCGTTCACAGCTATTATCTATTAGCAATACCATAAGTGAAGAACAAACAGAAA
CTAAAACCATATTTGAAAGAGGTGTCTCCAACAAGGGACGAGAGCGAGGCATTGGCCTTGCTAATGTCACAGAAATCTTA
GATAACTATATCAATGTAAACTTAGAAACACAGAGTAACAATTTCTCATTCACACAACAATTAACAATAACTAAAAAGGC
CTAA

Domains

Predicted by InterProScan.

GHKL domain (HATPase_c_5)

(160-263)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

38.189

95.131

0.363

Multiple sequence alignment