Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   CG712_RS04595 Genome accession   NZ_CP022547
Coordinates   891782..893800 (-) Length   672 a.a.
NCBI ID   WP_096811648.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain B59671     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 886782..898800
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG712_RS09930 - 887368..887508 (-) 141 WP_022096687.1 hypothetical protein -
  CG712_RS04575 (CG712_04610) - 887553..888576 (-) 1024 Protein_895 DUF6574 domain-containing protein -
  CG712_RS04585 (CG712_04620) - 888694..890079 (-) 1386 WP_096811647.1 Cof-type HAD-IIB family hydrolase -
  CG712_RS04590 (CG712_04625) - 890153..891118 (+) 966 WP_041827163.1 asparaginase -
  CG712_RS04595 (CG712_04630) recG/mmsA 891782..893800 (-) 2019 WP_096811648.1 ATP-dependent DNA helicase RecG Machinery gene
  CG712_RS04600 (CG712_04635) alr 893929..895032 (-) 1104 WP_096811649.1 alanine racemase -
  CG712_RS04605 (CG712_04640) acpS 895053..895412 (-) 360 WP_002951878.1 holo-ACP synthase -
  CG712_RS04610 (CG712_04645) - 895416..896447 (-) 1032 WP_011226531.1 3-deoxy-7-phosphoheptulonate synthase -
  CG712_RS04615 (CG712_04650) - 896545..897576 (-) 1032 WP_011226532.1 3-deoxy-7-phosphoheptulonate synthase -

Sequence

Protein


Download         Length: 672 a.a.        Molecular weight: 75578.07 Da        Isoelectric Point: 6.0659

>NTDB_id=201620 CG712_RS04595 WP_096811648.1 891782..893800(-) (recG/mmsA) [Streptococcus thermophilus strain B59671]
MIQLDSPIADLKGFGPKSAEKFTKLDLHTVGDLLLYFPFRYEDFKSKSIFELMDGEKAVITGTVVTPANVQYYGFKRNRL
SFKIKQGEAVIAINFFNQPYLVDKFEVGAEVAIFGKWDRKKSAVTGMKVLAHVEDDMQPVYHVAQGVSQAQLIKAIKVAF
DSGALNLLEESLPQVLMDKYRLMGRQEAVRVMHFPKDLAEYKQALRRIKFEELFYFQMNLQVLKAENKSETNGLAISYDE
VKIKAKIATLPFPLTKAQERSLSEILADMKSGAHMNRLLQGDVGSGKTVIASLAMYGAYTAGLQSALMVPTEILAEQHYQ
SLQGLFPELEVVLLTSGMKMADKKVALSKIESGEAQMIVGTHSLIQDAVIYHKLGLVITDEQHRFGVNQRRIFREKGDNP
DVLMMTATPIPRTLAITAFGEMDVSIIDQMPAGRKTIITRWVKHEQLDTVLTWIKSELEKDAQVYFISPLIEESESLDLK
NAVALHQELTEFFGDSATVALMHGRMKNDEKDQIMQDFKDKKSQILVSTTVIEVGVNVPNATVMVIMDADRFGLSQLHQL
RGRVGRGDKQSYCVLVANPKNDTGKKRMQAMCETTDGFVLAEEDLKMRGSGEIFGTRQSGIPEFQVADIVEDYNILEEAR
RVASQIVSDPNWRENPDWQVLEAHLRNQAEFD

Nucleotide


Download         Length: 2019 bp        

>NTDB_id=201620 CG712_RS04595 WP_096811648.1 891782..893800(-) (recG/mmsA) [Streptococcus thermophilus strain B59671]
ATGATTCAACTAGATTCACCAATTGCAGATTTGAAGGGCTTTGGTCCTAAGTCCGCTGAAAAATTTACCAAATTAGATTT
ACACACAGTTGGGGACCTCTTGCTTTATTTTCCTTTTCGATATGAAGATTTTAAGAGTAAGTCCATCTTTGAACTGATGG
ATGGAGAAAAGGCCGTCATTACAGGAACAGTGGTAACACCGGCCAATGTGCAGTATTATGGCTTTAAACGTAATCGTCTT
AGCTTTAAAATAAAGCAGGGTGAGGCTGTGATTGCCATTAATTTCTTTAATCAGCCTTATCTTGTGGACAAGTTTGAGGT
GGGGGCAGAAGTGGCTATCTTTGGCAAGTGGGACCGTAAGAAGTCTGCAGTGACTGGTATGAAAGTCTTGGCTCATGTTG
AGGACGATATGCAGCCAGTCTACCATGTGGCTCAGGGTGTTAGTCAGGCCCAGCTAATAAAGGCTATAAAGGTAGCTTTT
GACAGTGGTGCCCTTAATTTGTTGGAGGAAAGTCTCCCCCAAGTGCTGATGGACAAGTATCGTCTCATGGGACGTCAAGA
GGCTGTGCGTGTCATGCATTTTCCTAAAGATTTGGCTGAATATAAGCAGGCCCTACGTAGGATTAAGTTTGAGGAGCTCT
TTTATTTCCAGATGAATTTACAGGTGCTAAAGGCTGAGAATAAATCAGAGACCAATGGACTAGCGATTTCTTACGATGAG
GTAAAAATAAAAGCTAAGATTGCTACCCTTCCTTTCCCTCTGACCAAAGCCCAGGAGCGCAGTTTATCAGAAATCCTAGC
TGATATGAAATCTGGGGCTCACATGAACCGTCTCTTGCAGGGAGACGTGGGCTCAGGAAAGACAGTTATTGCTAGTCTTG
CCATGTATGGGGCCTATACGGCAGGATTGCAGTCTGCTCTCATGGTACCGACGGAAATCTTGGCAGAGCAGCATTATCAG
AGTTTGCAGGGGCTTTTTCCTGAGTTAGAGGTAGTGCTCTTAACTTCTGGGATGAAGATGGCAGATAAGAAAGTAGCTCT
TTCTAAAATTGAGTCTGGGGAGGCTCAAATGATTGTGGGAACTCACTCACTGATTCAGGATGCGGTGATTTATCATAAAC
TTGGGTTGGTGATTACTGATGAACAGCACCGATTTGGAGTTAATCAACGTCGTATTTTCCGAGAGAAGGGAGACAATCCT
GATGTCCTCATGATGACAGCAACACCCATTCCTAGGACCTTGGCAATCACTGCCTTTGGGGAGATGGATGTGTCAATCAT
TGATCAGATGCCGGCTGGACGTAAGACTATTATTACCCGTTGGGTTAAACATGAGCAACTAGACACCGTATTGACTTGGA
TTAAGAGTGAGTTGGAAAAAGATGCTCAGGTCTATTTTATTTCTCCTTTGATTGAAGAGTCTGAGTCTCTTGATTTGAAA
AATGCTGTTGCCCTTCATCAGGAACTCACAGAGTTTTTTGGAGATTCAGCTACGGTGGCTCTGATGCATGGTCGGATGAA
AAATGATGAAAAAGACCAAATTATGCAGGATTTTAAGGATAAAAAATCTCAGATTTTAGTATCAACCACAGTTATTGAAG
TTGGAGTTAACGTACCTAATGCTACGGTTATGGTCATTATGGATGCGGATCGTTTTGGACTTAGCCAGCTTCACCAGCTT
CGAGGGCGTGTAGGTCGTGGCGATAAGCAGTCCTACTGTGTTTTGGTGGCTAATCCTAAAAATGATACTGGTAAAAAACG
CATGCAGGCCATGTGTGAGACCACGGATGGCTTTGTTTTAGCAGAAGAGGACCTTAAAATGCGTGGCTCAGGAGAGATTT
TCGGGACGCGGCAGTCAGGCATTCCTGAATTTCAGGTGGCTGATATTGTGGAAGACTATAATATCCTAGAAGAAGCAAGG
CGCGTGGCCAGTCAAATTGTTTCTGACCCTAACTGGCGTGAGAATCCTGATTGGCAGGTGCTAGAAGCTCATTTGAGAAA
CCAAGCTGAGTTTGACTGA

Domains

Predicted by InterProScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(594-667)

Helicase conserved C-terminal domain (Helicase_C)

(457-567)

RecG wedge domain (RecG_wedge)

(11-157)

DEAD/DEAH box helicase (DEAD)

(255-412)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

71.088

99.851

0.71
  recG/mmsA Streptococcus pneumoniae R36A

71.088

99.851

0.71
  recG Bacillus subtilis subsp. subtilis str. 168

50

99.107

0.496
  recG Neisseria meningitidis strain C311

39.376

100

0.394

Multiple sequence alignment