Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | BKN48_RS01745 | Genome accession | NZ_CP017676 |
| Coordinates | 295643..295978 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain VV2 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 290643..300978
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKN48_RS01725 (BKN48_01725) | gcvT | 291234..292322 (-) | 1089 | WP_038829737.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| BKN48_RS01730 (BKN48_01730) | hepAA | 292764..294437 (+) | 1674 | WP_038829735.1 | DEAD/DEAH box helicase | - |
| BKN48_RS01735 (BKN48_01735) | yqhG | 294458..295252 (+) | 795 | WP_032726154.1 | YqhG family protein | - |
| BKN48_RS01740 (BKN48_01740) | sinI | 295436..295609 (+) | 174 | WP_014477323.1 | anti-repressor SinI | Regulator |
| BKN48_RS01745 (BKN48_01745) | sinR | 295643..295978 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| BKN48_RS01750 (BKN48_01750) | tasA | 296070..296855 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| BKN48_RS01755 (BKN48_01755) | sipW | 296920..297492 (-) | 573 | WP_080481282.1 | signal peptidase I SipW | - |
| BKN48_RS01760 (BKN48_01760) | tapA | 297476..298237 (-) | 762 | WP_070547528.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BKN48_RS01765 (BKN48_01765) | yqzG | 298508..298834 (+) | 327 | WP_021480018.1 | YqzG/YhdC family protein | - |
| BKN48_RS01770 (BKN48_01770) | spoIITA | 298876..299055 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| BKN48_RS01775 (BKN48_01775) | comGG | 299127..299501 (-) | 375 | WP_064671036.1 | ComG operon protein ComGG | Machinery gene |
| BKN48_RS01780 (BKN48_01780) | comGF | 299502..299885 (-) | 384 | WP_070547529.1 | ComG operon protein ComGF | Machinery gene |
| BKN48_RS01785 (BKN48_01785) | comGE | 299911..300258 (-) | 348 | WP_070547530.1 | ComG operon protein 5 | Machinery gene |
| BKN48_RS01790 (BKN48_01790) | comGD | 300242..300673 (-) | 432 | WP_070547531.1 | comG operon protein ComGD | Machinery gene |
| BKN48_RS01795 (BKN48_01795) | comGC | 300663..300959 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=201460 BKN48_RS01745 WP_003226345.1 295643..295978(+) (sinR) [Bacillus subtilis strain VV2]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=201460 BKN48_RS01745 WP_003226345.1 295643..295978(+) (sinR) [Bacillus subtilis strain VV2]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |