Detailed information NTG0201367

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: BKM67_RS07670
• Genome accession: NZ_CP017667
• Coordinates: 1545963..1546967 (-)
• Length: 334 a.a.
• NCBI ID: WP_004298830.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 1081
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	1536546..1551914	1545963..1546967	within	0

Gene organization within MGE regions

Location: 1536546..1551914

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BKM67_RS11125 (BKM67_07475)	-	1536546..1540835 (+)	4290	WP_275426154.1	hypothetical protein	-
BKM67_RS07660 (BKM67_07480)	-	1542883..1544244 (-)	1362	WP_024384329.1	HAMP domain-containing sensor histidine kinase	-
BKM67_RS07665 (BKM67_07485)	-	1544245..1544895 (-)	651	WP_024384330.1	response regulator transcription factor	-
BKM67_RS07670 (BKM67_07490)	ccpA	1545963..1546967 (-)	1005	WP_004298830.1	catabolite control protein A	Regulator
BKM67_RS07675 (BKM67_07495)	-	1547177..1548262 (+)	1086	WP_024384331.1	Xaa-Pro peptidase family protein	-
BKM67_RS11130	-	1548434..1548538 (-)	105	WP_172068998.1	LPXTG cell wall anchor domain-containing protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36786.97 Da
• Isoelectric Point: 5.5173

>NTDB_id=201367 BKM67_RS07670 WP_004298830.1 1545963..1546967(-) (ccpA) [Streptococcus suis strain 1081]
MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYF
ATLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
SVNIDYAAASVDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKDNGIEFNEGLVFESKYKYEEGYALAERILNA
GATAAYVAEDEIAAGLLNGVSDMGIKVPEDFEIITSDDSLVTKFTRPNLTSINQPLYDIGAIAMRMLTKIMHKEELENRE
VVLNHGIKVRKSTK

Nucleotide

• Length: 1005 bp

>NTDB_id=201367 BKM67_RS07670 WP_004298830.1 1545963..1546967(-) (ccpA) [Streptococcus suis strain 1081]
ATGTTAAACACTGACGATACGGTAACGATTTATGACGTTGCCCGCGAAGCAGGTGTATCCATGGCGACAGTATCGCGCGT
GGTAAATGGGAATAAAAACGTAAAGGAAAATACTCGTAAAAAAGTATTAGAAGTCATCGACCGTTTGGATTATCGTCCAA
ATGCTGTTGCACGTGGATTGGCCAGCAAGAAGACTACCACTGTGGGGGTTGTGATTCCAAACATTGCTAATGCTTATTTT
GCAACCTTGGCCAAAGGTATCGATGATATTGCCGATATGTACAAATACAATATCGTCCTAGCAAACAGTGATGAAAATGA
TGAGAAAGAAATCAATGTAGTAAATACCCTATTCTCAAAACAGGTGGACGGAATCATTTTCATGGGCTATCATTTGACAG
ACAAGATTCGTGCGGAGTTTTCACGCTCACGTACACCGATTGTTTTAGCTGGTACCGTGGATTTGGAGCACCAATTACCT
AGTGTCAATATTGACTATGCTGCCGCTAGTGTTGATGCAGTCAATCTGTTAGCTAAGAACAACAAGAAAATTGCCTTTGT
ATCAGGGCCGCTTGTAGATGACATCAATGGTAAAGTTCGTTTTGCAGGCTACAAACAAGGCTTGAAGGACAACGGAATCG
AGTTTAACGAAGGATTGGTTTTTGAATCCAAGTATAAATACGAGGAAGGCTACGCTCTAGCAGAACGTATTTTGAATGCC
GGAGCAACTGCAGCTTATGTTGCAGAAGATGAGATTGCTGCTGGTCTATTGAATGGTGTCAGTGATATGGGCATCAAGGT
TCCAGAAGACTTTGAAATCATTACAAGTGATGATTCCCTAGTGACCAAGTTTACCCGTCCAAACCTGACCTCTATCAATC
AGCCGCTATACGATATTGGTGCAATTGCTATGCGCATGCTCACCAAAATCATGCACAAGGAAGAGTTGGAAAACCGTGAG
GTAGTTCTTAACCACGGAATCAAAGTACGGAAATCAACTAAGTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (9-54)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-333)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	79.88	99.701	0.796
ccpA	Streptococcus gordonii str. Challis substr. CH1	79.279	99.701	0.79
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	58.912	99.102	0.584