Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | CGU45_RS14940 | Genome accession | NZ_CP022526 |
| Coordinates | 3123186..3123809 (-) | Length | 207 a.a. |
| NCBI ID | WP_003103268.1 | Uniprot ID | G3XD51 |
| Organism | Pseudomonas aeruginosa strain Ocean-1155 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3118186..3128809
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGU45_RS14920 (CGU45_14920) | aroB | 3118781..3119887 (-) | 1107 | WP_003107839.1 | 3-dehydroquinate synthase | - |
| CGU45_RS14925 (CGU45_14925) | aroK | 3119937..3120455 (-) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| CGU45_RS14930 (CGU45_14930) | pilQ | 3120467..3122611 (-) | 2145 | WP_094069650.1 | type 4a pilus secretin PilQ | Machinery gene |
| CGU45_RS14935 (CGU45_14935) | pilP | 3122665..3123189 (-) | 525 | WP_021263517.1 | type 4a pilus biogenesis lipoprotein PilP | - |
| CGU45_RS14940 (CGU45_14940) | pilO | 3123186..3123809 (-) | 624 | WP_003103268.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CGU45_RS14945 (CGU45_14945) | pilN | 3123806..3124402 (-) | 597 | WP_003095839.1 | type 4a pilus biogenesis protein PilN | Machinery gene |
| CGU45_RS14950 (CGU45_14950) | pilM | 3124402..3125466 (-) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| CGU45_RS14955 (CGU45_14955) | - | 3125651..3128122 (+) | 2472 | WP_019484455.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 22819.26 Da Isoelectric Point: 4.7787
>NTDB_id=201317 CGU45_RS14940 WP_003103268.1 3123186..3123809(-) (pilO) [Pseudomonas aeruginosa strain Ocean-1155]
MSLASSLESLRKIDINDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLSDMQAQLEQQAAEEETLKQQFSTKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVAQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPVAPGSTSKLRMSILAKTYRYNDKGLKK
MSLASSLESLRKIDINDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLSDMQAQLEQQAAEEETLKQQFSTKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVAQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPVAPGSTSKLRMSILAKTYRYNDKGLKK
Nucleotide
Download Length: 624 bp
>NTDB_id=201317 CGU45_RS14940 WP_003103268.1 3123186..3123809(-) (pilO) [Pseudomonas aeruginosa strain Ocean-1155]
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGATATCAACGATCTTGACCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTGAGCGACA
TGCAGGCTCAGCTCGAACAGCAGGCCGCGGAAGAGGAGACGCTCAAGCAGCAGTTCTCCACCAAGGCCTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAGGAGATGGAAGAGTCCTTCGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGCCTGGGCAGCGGCCTTGAGTTCGAGGAAATCAAGCTGCTTC
CCGAGGTTGCCCAGCAGTTCTACATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTATCCAGCCTGCCGCGGATCGTCACCCTGCATGACTTCGAGATCAAGCCGGTCGCGCCCGGCAGCACGTC
CAAGCTGCGCATGAGCATCCTGGCCAAGACCTATCGCTACAACGACAAGGGGCTGAAGAAATGA
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGATATCAACGATCTTGACCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTGAGCGACA
TGCAGGCTCAGCTCGAACAGCAGGCCGCGGAAGAGGAGACGCTCAAGCAGCAGTTCTCCACCAAGGCCTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAGGAGATGGAAGAGTCCTTCGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGCCTGGGCAGCGGCCTTGAGTTCGAGGAAATCAAGCTGCTTC
CCGAGGTTGCCCAGCAGTTCTACATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTATCCAGCCTGCCGCGGATCGTCACCCTGCATGACTTCGAGATCAAGCCGGTCGCGCCCGGCAGCACGTC
CAAGCTGCGCATGAGCATCCTGGCCAAGACCTATCGCTACAACGACAAGGGGCTGAAGAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
46.114 |
93.237 |
0.43 |
| pilO | Acinetobacter baumannii D1279779 |
43.979 |
92.271 |
0.406 |
| comO/pilO | Acinetobacter baylyi ADP1 |
43.455 |
92.271 |
0.401 |