Detailed information NTG0020108

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SDD27957_11155
• Genome accession: CM001076
• Coordinates: 2127663..2128769 (+)
• Length: 368 a.a.
• NCBI ID: EFY03808.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2122663..2133769

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDD27957_11130	-	2122758..2123300 (-)	543	EFY03803.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SDD27957_11135	-	2123314..2124348 (-)	1035	EFY03804.1	hypothetical protein	-
SDD27957_11140	-	2124398..2125681 (-)	1284	EFY03805.1	Zinc protease	-
SDD27957_11145	-	2125683..2126927 (-)	1245	EFY03806.1	hypothetical protein	-
SDD27957_11150	-	2127248..2127661 (+)	414	EFY03807.1	hypothetical cytosolic protein	-
SDD27957_11155	recF	2127663..2128769 (+)	1107	EFY03808.1	recombination protein F	Machinery gene
SDD27957_11160	-	2128826..2129689 (-)	864	EFY03809.1	hypothetical protein	-
SDD27957_11165	-	2129900..2131381 (-)	1482	EFY03810.1	inosine 5'-monophosphate dehydrogenase	-
SDD27957_11170	-	2131621..2132136 (-)	516	EFY03811.1	hypothetical protein	-
SDD27957_11175	-	2132133..2132444 (-)	312	EFY03812.1	putative transposase fregment	-
SDD27957_11180	-	2132649..2132942 (+)	294	EFY03813.1	transposase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41969.91 Da
• Isoelectric Point: 8.4064

>NTDB_id=20108 SDD27957_11155 EFY03808.1 2127663..2128769(+) (recF) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
MWIKELELKHYRNYDHLLTSFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRISGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLASYGTRVMEHRINFINTLEKEANTHHQAISNGLENLSLSYQSSVVFDKKTNIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKVLTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTVQVDSEIH

Nucleotide

• Length: 1107 bp

>NTDB_id=20108 SDD27957_11155 EFY03808.1 2127663..2128769(+) (recF) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGTAATTATGACCACCTGCTTACCTCATTTTCGTCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGGA
CGAGGGCTGACAAAGAATTGATTCATTTTGATCACTCAACTGTTTCCCTTACTGGTAAGATTCAGCGCATTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGTGTGACAAAGATTAATGCGCTAAAGCAAGCAAAATTATCTGATTA
TATCGGAACGATGATGGTTGTGCTTTTTGCACCAGAAGATTTGCAACTAGTTAAGGGAGCACCTAGCCTTCGCCGAAAAT
TTATCGACATTGACCTTGGTCAAATTAAGCCTGTTTACTTATCTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAACAAATTGATGCCGCTTTTCTAGCTGTCCTAGATGAGCAATTAGCTAGCTATGGAAC
CCGTGTCATGGAACATCGCATTAATTTTATCAATACGTTGGAAAAAGAAGCGAATACCCATCACCAAGCCATCTCAAATG
GTTTAGAAAATCTCTCCCTCTCCTATCAGTCGTCAGTTGTCTTTGATAAAAAAACTAATATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAAAAAGATTTCTTCCGTAAAAACACTAGTGTTGGCCCACATCGCGATGACTTGGCCTTTTA
CATTAACGGTATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAAGTCTTGACTGGAGATAATCCCATTCTTTTACTAGATGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAATT
GCCAGAAGGTATCCGTATTTTTCACGTGACAAAAGGAACCGTTCAAGTTGATTCTGAGATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.187	98.913	0.625
recF	Bacillus subtilis subsp. subtilis str. 168	45.455	100	0.462