Detailed information
Bioinformatically predicted
Overview
| Name | comGH | Type | Machinery gene |
| Locus tag | CGZ53_RS00815 | Genome accession | NZ_CP022435 |
| Coordinates | 133386..134342 (+) | Length | 318 a.a. |
| NCBI ID | WP_046389809.1 | Uniprot ID | - |
| Organism | Streptococcus uberis strain NZ01 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 128386..139342
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGZ53_RS00775 (CGZ53_00775) | - | 129257..129622 (+) | 366 | WP_100911837.1 | DUF1033 family protein | - |
| CGZ53_RS00780 (CGZ53_00780) | comGA/cglA | 129695..130636 (+) | 942 | WP_012657673.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CGZ53_RS00785 (CGZ53_00785) | comGB | 130569..131603 (+) | 1035 | WP_398583501.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CGZ53_RS00790 (CGZ53_00790) | comGC/cglC | 131604..131927 (+) | 324 | WP_012657675.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CGZ53_RS00795 (CGZ53_00795) | comGD | 131881..132318 (+) | 438 | WP_012657676.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CGZ53_RS00800 (CGZ53_00800) | comGE | 132359..132589 (+) | 231 | WP_230081134.1 | competence type IV pilus minor pilin ComGE | - |
| CGZ53_RS00805 (CGZ53_00805) | comGF | 132549..133004 (+) | 456 | WP_012657678.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CGZ53_RS00810 (CGZ53_00810) | comGG | 132982..133341 (+) | 360 | WP_037592916.1 | competence type IV pilus minor pilin ComGG | - |
| CGZ53_RS00815 (CGZ53_00815) | comGH | 133386..134342 (+) | 957 | WP_046389809.1 | class I SAM-dependent methyltransferase | Machinery gene |
| CGZ53_RS00820 (CGZ53_00820) | - | 134398..135588 (+) | 1191 | WP_012657681.1 | acetate kinase | - |
| CGZ53_RS00825 (CGZ53_00825) | - | 135706..135909 (+) | 204 | WP_012657682.1 | helix-turn-helix transcriptional regulator | - |
| CGZ53_RS00830 (CGZ53_00830) | - | 135911..136363 (+) | 453 | WP_012657683.1 | hypothetical protein | - |
| CGZ53_RS00835 (CGZ53_00835) | - | 136372..137025 (+) | 654 | WP_012657684.1 | CPBP family intramembrane glutamic endopeptidase | - |
| CGZ53_RS00840 (CGZ53_00840) | proC | 137051..137821 (-) | 771 | WP_100911838.1 | pyrroline-5-carboxylate reductase | - |
| CGZ53_RS00845 (CGZ53_00845) | pepA | 137843..138907 (-) | 1065 | WP_012657686.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 36029.10 Da Isoelectric Point: 4.7256
>NTDB_id=200664 CGZ53_RS00815 WP_046389809.1 133386..134342(+) (comGH) [Streptococcus uberis strain NZ01]
MNFEKIEKAYELILENAQLIENDLKTHIYDALIEQNSFYLGSPGASDHVVKNNEALAALSLSKEEWRRAFQFVFIKAGQT
EQLQANHQFTPDSIAFILLFLLEELSSNDTLDILEIGSGTGNLAQTLLNNSKKSLDYLGIELDDLLIDLSASIAEIIGSS
ARFIQEDAVRPQILKESDVIISDLPVGYYPNDDIARRYQVASPKEHTYAHHLLMEQSLKYLKQGGYALFLVPSNLLTSQQ
SDLLKKWLTDYAQVMALVTLPEMLFGHPSNAKSILVLQKKAEKVGETFVYPLTDLQNPEIIRHFMTEFKKWKQDNVFS
MNFEKIEKAYELILENAQLIENDLKTHIYDALIEQNSFYLGSPGASDHVVKNNEALAALSLSKEEWRRAFQFVFIKAGQT
EQLQANHQFTPDSIAFILLFLLEELSSNDTLDILEIGSGTGNLAQTLLNNSKKSLDYLGIELDDLLIDLSASIAEIIGSS
ARFIQEDAVRPQILKESDVIISDLPVGYYPNDDIARRYQVASPKEHTYAHHLLMEQSLKYLKQGGYALFLVPSNLLTSQQ
SDLLKKWLTDYAQVMALVTLPEMLFGHPSNAKSILVLQKKAEKVGETFVYPLTDLQNPEIIRHFMTEFKKWKQDNVFS
Nucleotide
Download Length: 957 bp
>NTDB_id=200664 CGZ53_RS00815 WP_046389809.1 133386..134342(+) (comGH) [Streptococcus uberis strain NZ01]
ATGAACTTTGAAAAAATTGAAAAAGCTTACGAGCTAATATTGGAAAATGCCCAATTAATTGAAAATGATTTAAAAACTCA
CATTTATGATGCCCTAATCGAGCAAAATTCTTTTTATTTAGGTAGCCCAGGTGCTAGTGACCATGTTGTAAAAAACAATG
AAGCGTTAGCTGCCTTGTCTTTAAGTAAGGAAGAATGGCGGAGAGCCTTTCAGTTTGTCTTCATTAAAGCTGGTCAGACG
GAACAATTACAAGCCAACCATCAGTTTACTCCTGACAGTATTGCCTTTATTCTCTTATTTTTGTTAGAAGAATTGAGTTC
AAATGATACCTTGGATATTCTAGAAATTGGAAGTGGTACTGGAAACTTAGCCCAAACTCTTCTAAACAATAGCAAGAAAT
CATTGGATTATCTAGGGATTGAATTGGATGATTTGTTGATTGATTTATCCGCAAGTATTGCTGAGATTATTGGATCTTCA
GCACGTTTTATTCAAGAAGATGCTGTGCGACCTCAAATCTTAAAAGAAAGTGATGTAATCATCAGTGATTTGCCAGTGGG
CTATTACCCGAATGATGACATAGCAAGACGCTACCAAGTGGCCAGTCCAAAGGAGCACACCTATGCCCATCATTTATTGA
TGGAACAGTCATTGAAATACCTTAAACAAGGTGGCTATGCTCTATTCTTGGTACCAAGTAATTTACTGACAAGCCAGCAA
AGTGATTTGTTAAAAAAATGGTTGACAGATTATGCGCAGGTCATGGCTCTTGTTACTTTGCCTGAAATGCTTTTTGGGCA
TCCTTCAAATGCAAAATCGATTTTAGTTCTCCAAAAGAAAGCTGAAAAAGTGGGTGAAACCTTTGTTTATCCTCTAACTG
ATCTTCAAAATCCAGAAATCATTCGTCATTTCATGACAGAATTTAAAAAGTGGAAACAAGATAATGTTTTTTCATAA
ATGAACTTTGAAAAAATTGAAAAAGCTTACGAGCTAATATTGGAAAATGCCCAATTAATTGAAAATGATTTAAAAACTCA
CATTTATGATGCCCTAATCGAGCAAAATTCTTTTTATTTAGGTAGCCCAGGTGCTAGTGACCATGTTGTAAAAAACAATG
AAGCGTTAGCTGCCTTGTCTTTAAGTAAGGAAGAATGGCGGAGAGCCTTTCAGTTTGTCTTCATTAAAGCTGGTCAGACG
GAACAATTACAAGCCAACCATCAGTTTACTCCTGACAGTATTGCCTTTATTCTCTTATTTTTGTTAGAAGAATTGAGTTC
AAATGATACCTTGGATATTCTAGAAATTGGAAGTGGTACTGGAAACTTAGCCCAAACTCTTCTAAACAATAGCAAGAAAT
CATTGGATTATCTAGGGATTGAATTGGATGATTTGTTGATTGATTTATCCGCAAGTATTGCTGAGATTATTGGATCTTCA
GCACGTTTTATTCAAGAAGATGCTGTGCGACCTCAAATCTTAAAAGAAAGTGATGTAATCATCAGTGATTTGCCAGTGGG
CTATTACCCGAATGATGACATAGCAAGACGCTACCAAGTGGCCAGTCCAAAGGAGCACACCTATGCCCATCATTTATTGA
TGGAACAGTCATTGAAATACCTTAAACAAGGTGGCTATGCTCTATTCTTGGTACCAAGTAATTTACTGACAAGCCAGCAA
AGTGATTTGTTAAAAAAATGGTTGACAGATTATGCGCAGGTCATGGCTCTTGTTACTTTGCCTGAAATGCTTTTTGGGCA
TCCTTCAAATGCAAAATCGATTTTAGTTCTCCAAAAGAAAGCTGAAAAAGTGGGTGAAACCTTTGTTTATCCTCTAACTG
ATCTTCAAAATCCAGAAATCATTCGTCATTTCATGACAGAATTTAAAAAGTGGAAACAAGATAATGTTTTTTCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGH | Streptococcus mutans UA140 |
67.192 |
99.686 |
0.67 |
| comGH | Streptococcus mutans UA159 |
66.877 |
99.686 |
0.667 |