Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   SDD27957_01280 Genome accession   CM001076
Coordinates   251608..252867 (+) Length   419 a.a.
NCBI ID   EFY01944.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 246608..257867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SDD27957_01255 - 248464..248754 (-) 291 EFY01939.1 hypothetical protein -
  SDD27957_01260 - 248910..249260 (+) 351 EFY01940.1 thioredoxin -
  SDD27957_01265 yajC 249367..249726 (+) 360 EFY01941.1 preprotein translocase subunit YajC -
  SDD27957_01270 - 249954..250703 (+) 750 EFY01942.1 putative undecaprenyl pyrophosphate synthetase -
  SDD27957_01275 - 250716..251510 (+) 795 EFY01943.1 putative phosphatidate cytidylyltransferase -
  SDD27957_01280 eeP 251608..252867 (+) 1260 EFY01944.1 Membrane endopeptidase, M50 family protein Regulator
  SDD27957_01285 - 253059..254915 (+) 1857 EFY01945.1 prolyl-tRNA synthetase -
  SDD27957_01290 - 255016..255525 (+) 510 EFY01946.1 hypothetical protein -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 45610.18 Da        Isoelectric Point: 8.9664

>NTDB_id=20017 SDD27957_01280 EFY01944.1 251608..252867(+) (eeP) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
MLGIITFIIIFGILVIVHEFGHFYFAKKSGILVREFAIGMGPKIFSHVDQEGTLYTLRILPLGGYVRMAGWGDDKTEIKT
GTPASLTLNEQGSVKRINLSQSKIDPTSLPMNVTSYDLEDDLSITGLVLDETKTYAVDHNATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILLVFLQGGMPDFSSNQVRVQENGAAAKAGIRDNDRIVTINGHKVKDWADLTE
AVQASTRNLGASETVKVTYKSGQTLKTVAVKPQKQGKQYALGVKARLKTGFVDKLLGGLELAWNGAFAILNTLKGLITAF
SLNKLGGPVAMYQMSNQAAQNGLDSVLSLMAMLSINLGIFNLIPIPALDGGKILMNIIEAIRRKPLKQETETYITLVGVA
IMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=20017 SDD27957_01280 EFY01944.1 251608..252867(+) (eeP) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
ATGTTAGGAATAATAACCTTTATTATTATTTTTGGGATTTTAGTCATTGTCCATGAATTTGGGCATTTCTATTTTGCCAA
AAAATCTGGGATTCTTGTCAGAGAATTTGCCATTGGTATGGGCCCCAAAATCTTTTCGCATGTTGACCAAGAAGGGACTC
TCTACACTTTGAGGATTTTGCCTTTGGGTGGTTACGTGCGTATGGCTGGTTGGGGAGATGACAAGACAGAAATCAAGACT
GGGACACCGGCTAGCTTGACACTAAATGAGCAAGGGTCGGTAAAGCGCATCAACTTGTCTCAAAGTAAGATTGATCCCAC
TAGCCTGCCCATGAATGTCACTTCCTATGATTTGGAAGATGACCTTAGTATCACCGGTTTGGTTTTGGATGAGACCAAGA
CCTATGCTGTTGACCATAATGCGACCATTGTTGAAGAAGATGGTACTGAGATTCGAATCGCTCCGCTTGATGTGCAGTAC
CAAAATGCTAGCATTGGTGGCCGCTTAATCACCAACTTTGCTGGTCCTATGAATAACTTTATTCTAGGGATTGTGGTCTT
TATCCTTCTTGTCTTTTTACAAGGTGGCATGCCAGATTTTAGTAGTAATCAAGTCCGTGTGCAAGAAAATGGTGCCGCTG
CTAAAGCTGGTATCCGCGACAATGACCGGATTGTCACTATCAATGGTCATAAGGTCAAGGATTGGGCAGATTTGACCGAA
GCTGTCCAAGCGTCTACTCGCAACCTAGGTGCTTCCGAAACGGTTAAGGTGACTTACAAATCAGGTCAAACCCTAAAAAC
CGTCGCTGTTAAGCCTCAAAAACAAGGCAAGCAATATGCTCTAGGTGTGAAGGCAAGGTTGAAAACAGGTTTTGTTGATA
AGCTCCTAGGCGGTTTAGAATTGGCTTGGAATGGTGCTTTTGCTATTTTGAATACCTTGAAAGGTCTGATCACTGCCTTT
AGCTTAAATAAGCTAGGTGGTCCAGTTGCCATGTACCAAATGTCTAATCAGGCTGCCCAAAATGGCTTAGATTCTGTCTT
ATCTCTCATGGCAATGCTCTCTATCAACTTGGGAATTTTCAACTTAATTCCCATCCCTGCCCTTGATGGTGGGAAAATCT
TGATGAATATTATTGAAGCCATTCGTCGCAAACCTTTGAAACAAGAAACAGAAACCTATATCACTCTTGTTGGGGTTGCC
ATCATGGTTGTTCTGATGATTGCCGTGACGTGGAATGATATTATGCGAGCTTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-405)

PDZ domain (PDZ_2)

(206-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

69.596

100

0.699
  eeP Streptococcus thermophilus LMD-9

69.359

100

0.697

Multiple sequence alignment