Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | BG586_RS06725 | Genome accession | NZ_CP017538 |
| Coordinates | 1321464..1321802 (-) | Length | 112 a.a. |
| NCBI ID | WP_006251644.1 | Uniprot ID | A0A248ZWT2 |
| Organism | Mannheimia haemolytica strain 1471 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1316464..1326802
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG586_RS06710 (BG586_06640) | - | 1316466..1317935 (-) | 1470 | WP_006250002.1 | HsdM family class I SAM-dependent methyltransferase | - |
| BG586_RS06715 (BG586_06645) | hsdR | 1317983..1320334 (-) | 2352 | WP_006250003.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| BG586_RS06720 (BG586_06650) | asd | 1320406..1321299 (-) | 894 | WP_006250004.1 | archaetidylserine decarboxylase | - |
| BG586_RS06725 (BG586_06655) | comEA/comE1 | 1321464..1321802 (-) | 339 | WP_006251644.1 | ComEA family DNA-binding protein | Machinery gene |
| BG586_RS06730 (BG586_06660) | - | 1322095..1323414 (+) | 1320 | WP_006253337.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| BG586_RS06735 (BG586_06665) | - | 1323478..1323894 (+) | 417 | WP_006250330.1 | MliC family protein | - |
| BG586_RS06740 (BG586_06670) | waaF | 1324005..1325042 (+) | 1038 | WP_006250331.1 | lipopolysaccharide heptosyltransferase II | - |
| BG586_RS06745 (BG586_06675) | rfaC | 1325109..1326068 (+) | 960 | WP_006250332.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| BG586_RS06750 (BG586_06680) | rpsL | 1326189..1326563 (+) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12111.91 Da Isoelectric Point: 10.0993
>NTDB_id=199979 BG586_RS06725 WP_006251644.1 1321464..1321802(-) (comEA/comE1) [Mannheimia haemolytica strain 1471]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
Nucleotide
Download Length: 339 bp
>NTDB_id=199979 BG586_RS06725 WP_006251644.1 1321464..1321802(-) (comEA/comE1) [Mannheimia haemolytica strain 1471]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCTAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCTAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.292 |
100 |
0.598 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.747 |
81.25 |
0.429 |
| comEA | Vibrio cholerae C6706 |
54.651 |
76.786 |
0.42 |
| comEA | Vibrio cholerae strain A1552 |
54.651 |
76.786 |
0.42 |