Detailed information NTG0198178

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: CD007_RS14870
• Genome accession: NZ_CP021903
• Coordinates: 2875587..2876591 (-)
• Length: 334 a.a.
• NCBI ID: WP_003229285.1
• Uniprot ID: P25144
• Organism: Bacillus subtilis strain ge28
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2870587..2881591

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CD007_RS14845 (CD007_14845)	acuA	2871514..2872146 (+)	633	WP_014480567.1	acetoin utilization protein acetyltransferase AcuA	-
CD007_RS14850 (CD007_14850)	acuB	2872173..2872817 (+)	645	WP_003229294.1	acetoin utilization AcuB family protein	-
CD007_RS14855 (CD007_14855)	acuC	2872814..2873977 (+)	1164	WP_015714526.1	acetoin utilization protein AcuC	-
CD007_RS14860 (CD007_14860)	motS	2873988..2874716 (-)	729	WP_015714527.1	flagellar motor protein MotS	-
CD007_RS14865 (CD007_14865)	motP	2874706..2875524 (-)	819	WP_015714528.1	flagellar motor protein MotP	-
CD007_RS14870 (CD007_14870)	ccpA	2875587..2876591 (-)	1005	WP_003229285.1	catabolite control protein A	Regulator
CD007_RS14875 (CD007_14875)	aroX	2876867..2877943 (-)	1077	WP_003223454.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
CD007_RS14880 (CD007_14880)	ytxJ	2878179..2878505 (-)	327	WP_015714529.1	bacillithiol system redox-active protein YtxJ	-
CD007_RS14885 (CD007_14885)	ytxH	2878529..2878984 (-)	456	WP_004398549.1	YtxH domain-containing protein	-
CD007_RS14890 (CD007_14890)	ytxG	2879015..2879437 (-)	423	WP_003229276.1	DUF948 domain-containing protein	-
CD007_RS14895 (CD007_14895)	murC	2879599..2880897 (-)	1299	WP_015714530.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36940.34 Da
• Isoelectric Point: 5.0249

>NTDB_id=198178 CD007_RS14870 WP_003229285.1 2875587..2876591(-) (ccpA) [Bacillus subtilis strain ge28]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKRSPVPIVLAASVEEQEETPSVAI
DYEQAIYDAVKLLVDKGHTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKK
PTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRKSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=198178 CD007_RS14870 WP_003229285.1 2875587..2876591(-) (ccpA) [Bacillus subtilis strain ge28]
ATGAGCAATATTACGATCTACGATGTAGCGAGAGAAGCTAATGTAAGCATGGCAACCGTTTCCCGTGTCGTGAACGGCAA
CCCGAATGTAAAACCGACAACGAGGAAAAAAGTCTTGGAAGCCATTGAACGTCTCGGTTACCGTCCAAACGCGGTGGCAA
GAGGGCTGGCAAGTAAAAAAACAACAACTGTAGGTGTCATCATTCCCGATATCTCAAGCATTTTCTATTCAGAGCTTGCA
CGCGGAATTGAAGATATCGCGACAATGTATAAATACAATATTATTTTGAGCAACTCTGACCAAAACATGGAGAAAGAGCT
GCACTTGTTAAACACAATGCTCGGCAAACAAGTGGACGGCATCGTGTTTATGGGCGGAAACATTACGGACGAGCATGTGG
CGGAATTTAAGCGTTCCCCAGTGCCGATTGTACTTGCCGCTTCTGTAGAAGAGCAGGAGGAAACACCGTCAGTCGCTATC
GATTACGAACAGGCGATTTATGATGCTGTGAAGCTTTTGGTTGATAAAGGACATACAGACATCGCATTCGTTTCCGGACC
AATGGCAGAACCGATCAACCGTTCAAAAAAACTCCAAGGCTACAAACGTGCGCTTGAAGAAGCGAACCTTCCGTTTAATG
AACAATTTGTAGCTGAAGGGGATTACACATATGATTCCGGACTCGAAGCACTGCAGCATCTGATGAGCCTGGATAAAAAA
CCGACAGCCATTCTTTCTGCAACTGATGAAATGGCACTCGGCATTATCCATGCCGCTCAGGATCAGGGCTTATCCATTCC
GGAGGATCTCGACATTATCGGCTTTGATAATACAAGATTAAGCCTCATGGTTCGTCCGCAGCTTTCAACAGTTGTTCAGC
CGACATATGATATTGGCGCCGTTGCGATGAGACTGCTGACGAAGCTCATGAATAAAGAGCCGGTTGAAGAGCATATCGTC
GAACTGCCGCACCGTATAGAGCTAAGAAAGTCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

3D structure

• PDB: 1ZVV
• PDB: 2FEP
• PDB: 3OQM
• PDB: 3OQN
• PDB: 3OQO

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.545	98.802	0.539
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.636	98.802	0.53
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503