Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BI283_RS06615 | Genome accession | NZ_CP017430 |
| Coordinates | 1402668..1403642 (+) | Length | 324 a.a. |
| NCBI ID | WP_105966585.1 | Uniprot ID | - |
| Organism | Staphylococcus simulans strain MR4 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1397668..1408642
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BI283_RS06585 (BI283_06550) | - | 1398477..1399019 (+) | 543 | WP_106421013.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| BI283_RS06590 (BI283_06555) | - | 1399032..1400489 (+) | 1458 | WP_103364379.1 | rhomboid family intramembrane serine protease | - |
| BI283_RS06595 (BI283_06560) | - | 1400473..1400673 (+) | 201 | WP_002481044.1 | YqgQ family protein | - |
| BI283_RS06600 (BI283_06565) | - | 1400673..1401659 (+) | 987 | WP_002481043.1 | ROK family glucokinase | - |
| BI283_RS06605 (BI283_06570) | - | 1401659..1401988 (+) | 330 | WP_105966587.1 | MTH1187 family thiamine-binding protein | - |
| BI283_RS06610 (BI283_06575) | - | 1401988..1402611 (+) | 624 | WP_057510470.1 | MBL fold metallo-hydrolase | - |
| BI283_RS06615 (BI283_06580) | comGA | 1402668..1403642 (+) | 975 | WP_105966585.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BI283_RS06620 (BI283_06585) | comGB | 1403614..1404687 (+) | 1074 | WP_105977709.1 | competence type IV pilus assembly protein ComGB | - |
| BI283_RS06625 (BI283_06590) | comGC | 1404705..1405034 (+) | 330 | WP_002481038.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BI283_RS06630 (BI283_06595) | - | 1405037..1405390 (+) | 354 | WP_257790907.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| BI283_RS14135 | - | 1405446..1405766 (+) | 321 | WP_103364375.1 | hypothetical protein | - |
| BI283_RS14140 (BI283_06600) | - | 1405819..1406175 (+) | 357 | WP_256324336.1 | competence type IV pilus minor pilin ComGF | - |
| BI283_RS06645 (BI283_06610) | - | 1406340..1406879 (+) | 540 | WP_002481034.1 | shikimate kinase | - |
| BI283_RS06650 (BI283_06615) | gcvT | 1407058..1408152 (+) | 1095 | WP_023015155.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36980.98 Da Isoelectric Point: 7.7580
>NTDB_id=198066 BI283_RS06615 WP_105966585.1 1402668..1403642(+) (comGA) [Staphylococcus simulans strain MR4]
MKRLFEKILIDAIAQRVSDIHFIQIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFLKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
MKRLFEKILIDAIAQRVSDIHFIQIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFLKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
Nucleotide
Download Length: 975 bp
>NTDB_id=198066 BI283_RS06615 WP_105966585.1 1402668..1403642(+) (comGA) [Staphylococcus simulans strain MR4]
ATGAAAAGGCTATTTGAAAAAATATTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACAAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACTTTTTTGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGTTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
ATGAAAAGGCTATTTGAAAAAATATTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACAAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACTTTTTTGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGTTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.372 |
99.691 |
0.602 |
| comGA | Staphylococcus aureus N315 |
60.372 |
99.691 |
0.602 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
37.931 |
98.457 |
0.373 |