Detailed information NTG0197635

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: BSBS38_RS13070
• Genome accession: NZ_CP017314
• Coordinates: 2438663..2439280 (-)
• Length: 205 a.a.
• NCBI ID: WP_046160608.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BS38
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2433663..2444280

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSBS38_RS13045 (BSBS38_02628)	rpsT	2433964..2434230 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
BSBS38_RS13050 (BSBS38_02629)	holA	2434245..2435288 (-)	1044	WP_029317888.1	DNA polymerase III subunit delta	-
BSBS38_RS21970	-	2435328..2435441 (-)	114	WP_122060479.1	hypothetical protein	-
BSBS38_RS13055 (BSBS38_02630)	yqzM	2435518..2435652 (+)	135	WP_003229983.1	YqzM family protein	-
BSBS38_RS13060 (BSBS38_02631)	comEC	2435693..2438023 (-)	2331	WP_046160607.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
BSBS38_RS13065 (BSBS38_02632)	comEB	2438027..2438596 (-)	570	WP_003229978.1	ComE operon protein 2	-
BSBS38_RS13070 (BSBS38_02633)	comEA	2438663..2439280 (-)	618	WP_046160608.1	competence protein ComEA	Machinery gene
BSBS38_RS13075 (BSBS38_02634)	comER	2439364..2440185 (+)	822	WP_032726195.1	late competence protein ComER	-
BSBS38_RS13080 (BSBS38_02635)	yqeM	2440251..2440994 (-)	744	WP_046160609.1	class I SAM-dependent DNA methyltransferase	-
BSBS38_RS13085 (BSBS38_02636)	rsfS	2440991..2441347 (-)	357	WP_014480315.1	ribosome silencing factor	-
BSBS38_RS13090 (BSBS38_02637)	yqeK	2441365..2441925 (-)	561	WP_014480316.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
BSBS38_RS13095 (BSBS38_02638)	nadD	2441915..2442484 (-)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
BSBS38_RS13100 (BSBS38_02639)	yhbY	2442496..2442786 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
BSBS38_RS13105 (BSBS38_02640)	aroE	2442780..2443622 (-)	843	WP_014480317.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21738.48 Da
• Isoelectric Point: 4.7284

>NTDB_id=197635 BSBS38_RS13070 WP_046160608.1 2438663..2439280(-) (comEA) [Bacillus subtilis strain BS38]
MNWLNQHKKAIVLAASAAVFTAIMIFLATGKNKEPVKQAVPTEAENTVVKQEANNDESSETIVIDIKGAVQHPGVYEMRT
GDRVSQAIEKAGGTSEQADEAQVNLAEILQDGTVVYIPKKGEETAVQQGGGGSVQSDGGKGALVNINTATLEELQGISGV
GPSKAEAIIAYREENGRFQTIEEITKVSGIGEKLFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=197635 BSBS38_RS13070 WP_046160608.1 2438663..2439280(-) (comEA) [Bacillus subtilis strain BS38]
ATGAATTGGTTGAATCAGCATAAGAAAGCAATTGTTTTAGCGGCTTCTGCGGCTGTTTTCACAGCGATTATGATCTTTCT
GGCCACAGGGAAAAATAAAGAGCCGGTGAAGCAAGCTGTACCAACAGAGGCAGAAAATACAGTGGTAAAGCAGGAAGCAA
ACAACGACGAGTCAAGCGAAACAATTGTGATAGACATCAAAGGTGCTGTTCAGCATCCTGGAGTTTATGAAATGCGAACA
GGGGACAGAGTATCTCAGGCAATTGAGAAAGCGGGCGGGACCAGTGAACAAGCAGACGAAGCGCAAGTAAATTTGGCGGA
GATTTTGCAGGACGGGACAGTGGTGTACATCCCGAAAAAGGGAGAGGAAACAGCAGTGCAGCAAGGTGGCGGAGGGTCTG
TCCAAAGCGATGGAGGGAAGGGAGCGCTGGTGAATATCAATACAGCAACCTTAGAGGAGTTACAAGGCATCTCAGGGGTG
GGGCCATCCAAAGCTGAAGCTATTATTGCATACCGGGAAGAAAACGGGCGTTTCCAAACAATTGAAGAAATCACTAAGGT
TTCAGGAATAGGTGAAAAGTTATTTGAGAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (63-118)

• Helix-hairpin-helix motif (HHH_3) (142-203)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	97.561	100	0.976
comEA	Staphylococcus aureus MW2	35.909	100	0.385
comEA	Staphylococcus aureus N315	35	100	0.376