Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   WH25_RS10035 Genome accession   NZ_CP017295
Coordinates   2100590..2101846 (-) Length   418 a.a.
NCBI ID   WP_172858967.1    Uniprot ID   A0AB35FSS7
Organism   Streptococcus gordonii strain IE35     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2095590..2106846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WH25_RS10970 - 2095645..2095788 (-) 144 WP_196768225.1 hypothetical protein -
  WH25_RS10015 (WH25_10015) - 2095894..2096760 (-) 867 WP_046164687.1 helix-turn-helix domain-containing protein -
  WH25_RS10020 (WH25_10020) - 2096828..2097733 (-) 906 WP_046164688.1 ABC transporter ATP-binding protein -
  WH25_RS10025 (WH25_10025) - 2097709..2098404 (-) 696 WP_046164689.1 ABC transporter transmembrane domain-containing protein -
  WH25_RS10030 (WH25_10030) - 2098664..2100514 (-) 1851 WP_046164690.1 proline--tRNA ligase -
  WH25_RS10035 (WH25_10035) eeP 2100590..2101846 (-) 1257 WP_172858967.1 RIP metalloprotease RseP Regulator
  WH25_RS10040 (WH25_10040) - 2102003..2102806 (-) 804 WP_012130880.1 phosphatidate cytidylyltransferase -
  WH25_RS10045 (WH25_10045) - 2102815..2103564 (-) 750 WP_008809837.1 isoprenyl transferase -
  WH25_RS10050 (WH25_10050) yajC 2103824..2104156 (-) 333 WP_012130881.1 preprotein translocase subunit YajC -
  WH25_RS10055 (WH25_10055) - 2104330..2106444 (-) 2115 WP_046164691.1 ATP-dependent Clp protease ATP-binding subunit -

Sequence


Protein


Download         Length: 418 a.a.        Molecular weight: 45671.18 Da        Isoelectric Point: 6.7707

>NTDB_id=197443 WH25_RS10035 WP_172858967.1 2100590..2101846(-) (eeP) [Streptococcus gordonii strain IE35]
MMGLLTFIIVFGIIVVVHEYGHFYFAKKSGILVREFAIGMGPKIFSHIGKDGTAYTIRILPLGGYVRMAGWSDDTTEIKT
GTPVSLTLNEEGKVIRVNLSGKKIDQTALPMNVTSFDFEDKLEITGLVLEESRTYSVDHDATIVEADGTEVRIAPLDVQY
QNATIWGRLITNFAGPMNNFILGIVAFWILIALQGGVQNLDTNHVQVAPNGALAQAGVKNNDQILKVGQTEISNWDDLTQ
AVEKETKGQKNPKLNLTVKSGNETKDVTVSPKKEGDRYLLGVTPGMKSDLMSMMVGGLTMAWDAAFRILNALKNLIFHPS
LNQLGGPVAIFRVSSQAAQAGLDQVISLLALLSINIGIFNLIPIPALDGGKIVLNIIEAIRRKPLKRETETYVTLAGVAI
MVVLMIAVTWNDIMRTFF

Nucleotide


Download         Length: 1257 bp        

>NTDB_id=197443 WH25_RS10035 WP_172858967.1 2100590..2101846(-) (eeP) [Streptococcus gordonii strain IE35]
ATTATGGGACTCCTCACCTTCATCATTGTTTTTGGTATTATTGTAGTGGTCCATGAGTATGGGCATTTCTACTTTGCCAA
AAAGTCAGGCATTCTCGTTCGAGAATTTGCCATTGGAATGGGACCGAAAATCTTTTCTCATATTGGAAAAGATGGAACAG
CCTATACCATTCGGATTCTTCCTCTAGGTGGCTATGTGCGCATGGCTGGATGGAGTGACGATACAACTGAAATCAAAACT
GGAACACCTGTCAGTCTGACTCTAAATGAAGAAGGCAAGGTTATTCGAGTAAATCTATCTGGCAAGAAGATTGACCAGAC
AGCCCTGCCAATGAATGTGACAAGTTTTGATTTTGAAGATAAATTAGAAATCACTGGTTTGGTTCTTGAAGAAAGTAGGA
CCTACTCAGTTGATCACGATGCAACTATCGTTGAAGCAGATGGGACAGAAGTTCGGATTGCGCCTTTAGATGTTCAGTAC
CAAAATGCAACAATCTGGGGCCGTTTAATCACAAACTTTGCTGGCCCTATGAATAACTTTATTTTGGGAATCGTAGCCTT
TTGGATCCTAATTGCTCTGCAAGGTGGGGTTCAAAATTTGGACACAAACCATGTACAGGTTGCTCCAAACGGCGCCTTAG
CTCAAGCTGGTGTAAAAAATAACGACCAGATTCTAAAGGTTGGTCAGACAGAAATTTCAAACTGGGATGATTTGACTCAG
GCAGTTGAAAAGGAAACGAAAGGTCAAAAGAATCCCAAACTTAACTTGACAGTTAAAAGCGGAAACGAGACCAAAGATGT
GACAGTCAGTCCTAAAAAAGAAGGGGACCGTTACTTATTAGGTGTCACGCCAGGCATGAAGTCGGATCTGATGTCCATGA
TGGTAGGTGGTCTGACCATGGCCTGGGATGCGGCCTTCCGTATTTTGAATGCTTTGAAAAACTTGATTTTCCATCCTAGT
CTTAATCAACTGGGAGGACCGGTTGCTATCTTCCGTGTCAGCAGTCAAGCGGCACAAGCTGGTCTGGATCAGGTGATTAG
TCTATTGGCTCTGTTATCAATCAATATTGGTATTTTCAATTTGATTCCGATTCCAGCTCTTGATGGTGGAAAGATTGTTC
TCAACATTATTGAAGCAATTCGCAGAAAACCGCTCAAGCGCGAAACAGAGACTTATGTAACCTTAGCAGGTGTAGCGATT
ATGGTTGTGCTGATGATTGCTGTTACCTGGAATGATATTATGCGTACATTCTTTTAA

Domains


Predicted by InterproScan.

(205-269)

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

64.048

100

0.644

  eeP Streptococcus thermophilus LMD-9

63.81

100

0.641


Multiple sequence alignment