Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   WH25_RS04735 Genome accession   NZ_CP017295
Coordinates   975092..975895 (+) Length   267 a.a.
NCBI ID   WP_008809002.1    Uniprot ID   A8AWC0
Organism   Streptococcus gordonii strain IE35     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 970092..980895
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WH25_RS10990 (WH25_04715) - 970432..970803 (+) 372 WP_046165831.1 hypothetical protein -
  WH25_RS04720 (WH25_04720) thrS 970895..972838 (+) 1944 WP_012000240.1 threonine--tRNA ligase -
  WH25_RS04725 (WH25_04725) micA 973044..973745 (+) 702 WP_012000241.1 response regulator YycF Regulator
  WH25_RS04730 (WH25_04730) micB 973738..975099 (+) 1362 WP_008809003.1 cell wall metabolism sensor histidine kinase VicK Regulator
  WH25_RS04735 (WH25_04735) vicX 975092..975895 (+) 804 WP_008809002.1 MBL fold metallo-hydrolase Regulator
  WH25_RS04740 (WH25_04740) - 975930..976286 (+) 357 WP_008809001.1 YbaN family protein -
  WH25_RS04745 (WH25_04745) rnc 976529..977227 (+) 699 WP_008809000.1 ribonuclease III -
  WH25_RS04750 (WH25_04750) smc 977218..980751 (+) 3534 WP_046165830.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29688.63 Da        Isoelectric Point: 5.9427

>NTDB_id=197418 WH25_RS04735 WP_008809002.1 975092..975895(+) (vicX) [Streptococcus gordonii strain IE35]
MTKEGFKYSILASGSSGNCFYLETAQKKILVDAGLSGKKITSLLSEINRKPEDLDAILVTHEHKDHIHGVGVLARKYNLD
IYANEDTWKAMDSALGKIDISQKHIFEMGKVMTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGVV
ENADGYLIESNHDVEILRSGAYPWSLKQRILSDKGHLSNEDGADTMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLAVNHDFQVLDTSPDTATPLTSI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=197418 WH25_RS04735 WP_008809002.1 975092..975895(+) (vicX) [Streptococcus gordonii strain IE35]
ATGACTAAGGAAGGTTTTAAGTATAGCATTTTAGCATCTGGATCTAGTGGTAATTGTTTTTATTTAGAAACAGCCCAAAA
GAAGATTTTAGTGGATGCGGGACTATCTGGTAAAAAAATCACTAGTCTCCTAAGTGAAATTAATCGTAAACCAGAAGATT
TAGATGCTATTTTAGTAACTCATGAACATAAGGATCACATTCATGGTGTTGGGGTCTTAGCCCGCAAGTATAATTTAGAT
ATCTATGCTAATGAAGATACTTGGAAAGCTATGGATAGTGCCTTAGGGAAAATTGATATCAGCCAAAAGCATATTTTTGA
AATGGGTAAGGTTATGACTTTTGGTGATATAGATATTGAAAGTTTTGGTGTTAGCCATGATGCGGCGGCACCACAATTTT
ATCGGTTTATGAAAGACGATAAAAGCTTTGTCATGCTGACGGATACGGGCTATGTGAGTGACCGTATGGCTGGAGTAGTT
GAAAATGCTGATGGTTACTTGATTGAGAGTAATCACGATGTAGAAATTTTGCGTAGTGGAGCTTACCCCTGGAGTCTTAA
GCAACGTATTTTATCTGATAAAGGGCATTTATCTAATGAAGATGGTGCTGATACGATGATTCGAACCTTGGGGAACCGTA
CCAAAAAGATTTATCTAGGTCACTTGAGTAAGGAGAATAATATCAAGGAGCTGGCTCATATGACTATGGTTAATCAGCTG
GCTCAAGCTGACTTGGCAGTCAATCATGACTTTCAAGTTTTGGATACTTCGCCTGATACGGCTACGCCTCTGACATCAAT
TTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AWC0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

80.524

100

0.805

Multiple sequence alignment