Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   WH25_RS04695 Genome accession   NZ_CP017295
Coordinates   966239..967243 (+) Length   334 a.a.
NCBI ID   WP_046165835.1    Uniprot ID   -
Organism   Streptococcus gordonii strain IE35     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 961239..972243
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WH25_RS04675 (WH25_04675) - 961646..962674 (-) 1029 WP_046165838.1 ABC transporter substrate-binding protein -
  WH25_RS04680 (WH25_04680) - 962730..963485 (-) 756 WP_046165837.1 ABC transporter ATP-binding protein -
  WH25_RS04685 (WH25_04685) - 963487..964533 (-) 1047 WP_046165836.1 FecCD family ABC transporter permease -
  WH25_RS04690 (WH25_04690) - 964992..966074 (-) 1083 WP_045634639.1 M24 family metallopeptidase -
  WH25_RS04695 (WH25_04695) ccpA 966239..967243 (+) 1005 WP_046165835.1 catabolite control protein A Regulator
  WH25_RS04700 (WH25_04700) - 967387..968385 (+) 999 WP_046165834.1 glycosyltransferase family 4 protein -
  WH25_RS04705 (WH25_04705) - 968387..969700 (+) 1314 WP_046165833.1 glycosyltransferase family 4 protein -
  WH25_RS04710 (WH25_04710) - 969736..970098 (+) 363 WP_046165832.1 hypothetical protein -
  WH25_RS10990 (WH25_04715) - 970432..970803 (+) 372 WP_046165831.1 hypothetical protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37074.24 Da        Isoelectric Point: 7.3501

>NTDB_id=197415 WH25_RS04695 WP_046165835.1 966239..967243(+) (ccpA) [Streptococcus gordonii strain IE35]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPSITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTIDVEHQLPS
VNIDYKQATIDAITFLAKRNKKIAFVCGPLVDDINGKVRLSGYKTALKSKKLSYSEGLVFESKYSYDDGYNLAERVIASK
ATAAFVTGDELAAGLLNGLANRGVKIPEDFEIITSDDSQISRYTRPNLSTISQPLYDLGAISMRMLTKIMHKEELEEREV
VLSHGIFERQSTKK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=197415 WH25_RS04695 WP_046165835.1 966239..967243(+) (ccpA) [Streptococcus gordonii strain IE35]
ATGAACACAGACGATACAGTAACCATTTATGATGTCGCCCGTGAAGCAGGGGTTTCTATGGCGACAGTTAGTCGTGTAGT
GAATGGAAACAAGAATGTAAAAGAAAACACTCGGAAAAAAGTTTTGGAAGTAATTGATCGCCTTGATTATCGTCCAAATG
CAGTAGCTCGTGGTTTGGCTAGCAAGAAGACTACGACAGTTGGAGTTGTGATTCCAAGCATTACAAATAGTTATTTCTCA
ACACTAGCAAAAGGAATTGATGATATTGCTGAGATGTATAAATACAATATCGTCCTAGCAAATAGTGACGAGGATGATGA
TAAGGAAGTTTCAGTTGTAAATACTCTCTTTTCTAAGCAAGTAGATGGTATTATCTTTATGGGTTACCACCTTACTGAAA
AGATTCGTTCAGAATTTTCACGCTCACGCACGCCAGTTGTCTTGGCTGGAACTATTGATGTGGAGCACCAATTGCCAAGT
GTTAATATAGATTATAAACAGGCTACAATTGATGCTATCACATTCCTTGCTAAGCGCAATAAAAAAATTGCTTTTGTATG
CGGACCTTTAGTTGATGATATCAATGGAAAAGTACGCTTATCCGGTTATAAAACGGCTCTTAAGAGTAAAAAGCTGTCAT
ACAGCGAAGGTCTTGTTTTTGAGTCTAAGTATAGCTATGATGATGGCTATAATTTAGCTGAACGAGTAATTGCTTCTAAA
GCAACGGCTGCTTTTGTTACAGGTGATGAGCTGGCAGCTGGTCTTTTAAACGGACTAGCTAATCGTGGAGTAAAAATTCC
AGAGGATTTTGAAATTATTACTAGCGATGATTCACAGATATCTCGCTATACACGTCCAAATTTGTCGACTATCAGCCAGC
CTTTATATGATTTAGGTGCTATTAGTATGCGTATGCTGACTAAAATTATGCACAAAGAAGAGTTGGAAGAACGTGAAGTT
GTTTTATCTCATGGTATTTTCGAACGTCAGTCAACTAAAAAATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(175-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

98.204

100

0.982
  ccpA Streptococcus pneumoniae D39

86.527

100

0.865
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.402

99.102

0.569

Multiple sequence alignment