Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   A4W86_RS06620 Genome accession   NZ_CP017272
Coordinates   1322268..1323545 (-) Length   425 a.a.
NCBI ID   WP_025016413.1    Uniprot ID   A0A9N7J0I0
Organism   Latilactobacillus sakei strain TMW 1.1239     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1317268..1328545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A4W86_RS06615 (A4W86_06570) - 1320533..1322242 (-) 1710 WP_011374954.1 proline--tRNA ligase -
  A4W86_RS06620 (A4W86_06575) eeP 1322268..1323545 (-) 1278 WP_025016413.1 RIP metalloprotease RseP Regulator
  A4W86_RS06625 (A4W86_06580) - 1323752..1324540 (-) 789 WP_016265347.1 phosphatidate cytidylyltransferase -
  A4W86_RS06630 (A4W86_06585) - 1324571..1325326 (-) 756 WP_011374957.1 isoprenyl transferase -
  A4W86_RS06635 (A4W86_06590) - 1325494..1328241 (+) 2748 WP_251950560.1 YhgE/Pip domain-containing protein -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 46663.36 Da        Isoelectric Point: 9.7840

>NTDB_id=197192 A4W86_RS06620 WP_025016413.1 1322268..1323545(-) (eeP) [Latilactobacillus sakei strain TMW 1.1239]
MAAIIAFIIIFGILVVVHEFGHFYMAKRSGILVREFSVGMGPKLFATRKNGTTYTIRWLPLGGYVRMAGMADDESEIEAG
TQATLILDEQGRVQQINTSDKVTTLNGVPFQIAKTDLQKELWVEGYEGGDESEMKRYPVLHDATIIEADGTEVQIAPVDV
QFQSATLINRMLTNFAGPFNNFILAILAFILFAFLSGGVPQQSNQIGTVQKNSAAQRAGLKANDRLLKVDNKKVASFTDF
SAIISEHPNETVAVRVQRGATEKTIKVTPKAVKVANQKEKVGQVGVTQKVKMDHSLKAKISYGFTQAWSIASQIFKILGS
FLTGGFSLDKLSGPVGMYSMTTQFTQQGFNALVYFLAFLSLNLGIMNLIPIPALDGGKLVLNIIEAIRRKPISPEKEGIV
TLIGVGIMVLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=197192 A4W86_RS06620 WP_025016413.1 1322268..1323545(-) (eeP) [Latilactobacillus sakei strain TMW 1.1239]
TTGGCTGCAATTATTGCGTTTATCATCATCTTTGGTATTTTAGTAGTCGTTCATGAATTTGGGCATTTTTACATGGCTAA
GCGCTCAGGCATTTTGGTGCGAGAGTTTTCTGTCGGCATGGGACCTAAATTATTTGCAACTCGCAAAAACGGCACAACTT
ACACCATCCGGTGGTTACCATTAGGTGGTTACGTTCGAATGGCGGGAATGGCCGACGATGAATCTGAAATTGAAGCTGGC
ACACAAGCGACTTTAATTTTAGACGAACAAGGACGCGTTCAACAGATTAATACAAGTGACAAGGTCACCACGTTAAACGG
GGTACCTTTCCAAATTGCTAAAACAGATTTACAAAAGGAATTGTGGGTCGAAGGTTATGAAGGCGGCGACGAGTCAGAAA
TGAAACGTTATCCCGTCTTACATGATGCGACGATTATCGAAGCGGACGGAACGGAAGTGCAAATCGCACCCGTGGATGTC
CAATTCCAATCAGCAACGTTGATTAATCGGATGTTAACGAACTTTGCCGGACCATTTAATAACTTCATCCTCGCAATTCT
AGCCTTTATCCTCTTCGCTTTTCTAAGCGGGGGTGTGCCACAGCAATCCAATCAAATTGGCACGGTACAAAAGAATTCGG
CTGCTCAAAGGGCAGGCTTAAAAGCCAACGATCGTCTTTTGAAGGTTGATAACAAAAAAGTAGCGAGCTTCACTGACTTT
AGTGCGATAATTTCAGAACACCCTAACGAAACTGTTGCGGTGCGCGTTCAACGGGGCGCAACTGAAAAGACAATCAAGGT
GACTCCCAAGGCTGTCAAAGTGGCTAACCAAAAAGAAAAGGTTGGTCAAGTAGGGGTCACACAAAAAGTCAAAATGGATC
ATAGCCTAAAGGCCAAGATTTCTTACGGCTTTACACAAGCTTGGTCAATTGCCAGTCAGATTTTCAAGATCCTCGGGTCA
TTTTTAACCGGTGGGTTCTCACTAGATAAATTATCGGGGCCGGTCGGTATGTATTCAATGACGACCCAATTTACCCAACA
AGGCTTTAATGCGTTAGTTTATTTCTTGGCGTTCTTATCACTTAATTTGGGGATTATGAATCTAATTCCGATTCCGGCGT
TAGATGGTGGTAAGTTAGTCTTGAACATTATTGAAGCGATTCGTCGCAAACCAATTTCACCTGAAAAAGAAGGCATCGTG
ACATTAATCGGTGTCGGTATTATGGTGTTATTAATGGTCTTAGTCACGTGGAATGATATACAACGATTTTTCTTTTAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(206-258)

Peptidase family M50 (Peptidase_M50)

(6-411)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

48.148

100

0.489
  eeP Streptococcus thermophilus LMG 18311

48.148

100

0.489

Multiple sequence alignment